C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001J4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176771-ENSG00000152127 CGP 9606 2:132671799-134454621
GeneTranscriptPositionBiotype
ENSG00000152127 (MGAT5)
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 		ENST00000281923 (MGAT5-201) 134254259-134454620 protein_coding
ENST00000409645 (MGAT5-001) 134120182-134454621 protein_coding
ENST00000468758 (MGAT5-004) 134119983-134254644 processed_transcript
ENST00000481801 (MGAT5-003) 134119983-134254606 processed_transcript
ENST00000488365 (MGAT5-002) 134253104-134254514 processed_transcript
ENSG00000176771 (NCKAP5)
NCK-associated protein 5 		ENST00000317721 (NCKAP5-201) 132671800-133568460 protein_coding
ENST00000358991 (NCKAP5-005) 133213716-133527185 protein_coding
ENST00000405974 (NCKAP5-202) 132671800-133568460 protein_coding
ENST00000409213 (NCKAP5-002) 132673049-133568463 protein_coding
ENST00000409261 (NCKAP5-001) 132671799-133568460 protein_coding
ENST00000427594 (NCKAP5-004) 133121969-133517513 protein_coding
ENST00000473859 (NCKAP5-003) 132731949-132782023 processed_transcript
ENSG00000200708 (RN7SKP93)
RNA, 7SK small nuclear pseudogene 93 		ENST00000363838 (RN7SKP93-201) 133596091-133596399 misc_RNA
ENSG00000222068 (RN7SKP154)
RNA, 7SK small nuclear pseudogene 154 		ENST00000410136 (RN7SKP154-201) 133391109-133391398 misc_RNA
ENSG00000223430 (AC011243.1)
 ENST00000420184 (AC011243.1-001) 133554315-133558227 lincRNA
ENSG00000226953 (AC010890.1)
 ENST00000432414 (AC010890.1-003) 133266195-133284762 antisense
ENST00000454699 (AC010890.1-002) 133264968-133269010 antisense
ENST00000606428 (AC010890.1-004) 133266242-133269041 antisense
ENSG00000228721 (AC016909.2)
 ENST00000415916 (AC016909.2-001) 132911096-132911261 processed_pseudogene
ENSG00000232474 (NCKAP5-IT1)
NCKAP5 intronic transcript 1 (non-protein coding) 		ENST00000416437 (NCKAP5-IT1-001) 133431666-133433897 sense_intronic
ENSG00000233729 (AC016909.1)
 ENST00000424510 (AC016909.1-001) 132915557-132931494 antisense
ENSG00000234060 (EDDM3CP)
epididymal protein 3C, pseudogene 		ENST00000415977 (EDDM3CP-001) 134319654-134320078 processed_pseudogene
ENSG00000279512 (RP11-575M22.1)
 ENST00000623763 (RP11-575M22.1-001) 133117004-133119052 TEC
CIL_0001J4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049690-ENSMUSG00000036155 CGP 10090 1:125913620-127488336
GeneTranscriptPositionBiotype
ENSMUSG00000036155 (Mgat5)
mannoside acetylglucosaminyltransferase 5 		ENSMUST00000038361 (Mgat5-001) 127205018-127488336 protein_coding
ENSMUST00000171405 (Mgat5-201) 127306762-127483704 protein_coding
ENSMUST00000189427 (Mgat5-002) 127205015-127388212 retained_intron
ENSMUST00000190921 (Mgat5-003) 127205028-127398792 retained_intron
ENSMUSG00000049690 (Nckap5)
NCK-associated protein 5 		ENSMUST00000057846 (Nckap5-003) 125914743-126448456 protein_coding
ENSMUST00000094609 (Nckap5-201) 125913637-126830632 protein_coding
ENSMUST00000094610 (Nckap5-005) 125914960-126023103 protein_coding
ENSMUST00000112583 (Nckap5-202) 125913637-126830632 protein_coding
ENSMUST00000159934 (Nckap5-004) 126027877-126035125 processed_transcript
ENSMUST00000160693 (Nckap5-008) 126258401-126738202 protein_coding
ENSMUST00000160736 (Nckap5-006) 125914319-125965200 processed_transcript
ENSMUST00000161954 (Nckap5-001) 125913620-126492927 protein_coding
ENSMUST00000162646 (Nckap5-007) 126222627-126830799 protein_coding
ENSMUST00000162647 (Nckap5-010) 126527540-126830481 retained_intron
ENSMUST00000162664 (Nckap5-009) 126525039-126738190 retained_intron
ENSMUST00000162877 (Nckap5-002) 125913648-126492742 protein_coding
ENSMUSG00000099471 (RP23-323H18.3)
predicted gene 8451 		ENSMUST00000170338 (RP23-323H18.3-001) 127282662-127283108 processed_pseudogene
ENSMUSG00000101600 (RP23-319M19.1)
RIKEN cDNA 4930599A14 gene 		ENSMUST00000186724 (RP23-319M19.1-001) 126872203-126876589 lincRNA
ENSMUST00000188266 (RP23-319M19.1-002) 126874745-126876615 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001J4_0001ENSG00000152127ENST00000281923ENST00000409645ENST00000468758ENST00000481801ENST00000488365ENSG00000176771ENST00000317721ENST00000358991ENST00000405974ENST00000409213ENST00000409261ENST00000427594ENST00000473859ENSG00000200708ENST00000363838ENSG00000222068ENST00000410136ENSG00000223430ENST00000420184ENSG00000226953ENST00000432414ENST00000454699ENST00000606428ENSG00000228721ENST00000415916ENSG00000232474ENST00000416437ENSG00000233729ENST00000424510ENSG00000234060ENST00000415977ENSG00000279512ENST00000623763CIL_0001J4_0002ENSMUSG00000036155ENSMUST00000038361ENSMUST00000171405ENSMUST00000189427ENSMUST00000190921ENSMUSG00000049690ENSMUST00000057846ENSMUST00000094609ENSMUST00000094610ENSMUST00000112583ENSMUST00000159934ENSMUST00000160693ENSMUST00000160736ENSMUST00000161954ENSMUST00000162646ENSMUST00000162647ENSMUST00000162664ENSMUST00000162877ENSMUSG00000099471ENSMUST00000170338ENSMUSG00000101600ENSMUST00000186724ENSMUST00000188266
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001J4_0001ENSG00000152127ENST00000281923ENST00000409645ENSG00000176771ENST00000317721ENST00000405974ENST00000409213ENST00000409261ENST00000427594ENST00000473859ENSG00000200708ENST00000363838ENSG00000222068ENST00000410136ENSG00000223430ENST00000420184ENSG00000226953ENST00000432414ENST00000454699ENST00000606428ENSG00000228721ENST00000415916ENSG00000232474ENST00000416437ENSG00000233729ENST00000424510ENSG00000234060ENST00000415977ENSG00000279512ENST00000623763CIL_0001J4_0002ENSMUSG00000036155ENSMUST00000038361ENSMUST00000171405ENSMUSG00000049690ENSMUST00000057846ENSMUST00000094609ENSMUST00000094610ENSMUST00000112583ENSMUST00000160693ENSMUST00000160736ENSMUST00000161954ENSMUST00000162646ENSMUST00000162664ENSMUST00000162877ENSMUSG00000099471ENSMUST00000170338ENSMUSG00000101600ENSMUST00000186724ENSMUST00000188266
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152127 ENST00000281923 6.018±0.00 7.214±0.00 N/A 1.837±0.00 2.347±1.44 4.288±0.67 8.071±0.00 7.493±0.00 1.742±0.21 5.370±0.00 0.345±0.14 7.832±1.33 8.400±4.03 3.612±1.47
ENST00000409645 N/A 3.426±0.00 1.098±0.00 1.749±0.00 1.186±0.00 N/A 3.437±1.94 0.714±0.31 N/A N/A N/A 5.003±0.00 1.335±0.00 N/A
ENST00000468758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176771 ENST00000317721 0.109±0.00 N/A N/A N/A 0.215±0.00 0.047±0.00 N/A 0.484±0.00 0.073±0.00 N/A 0.010±0.00 0.163±0.06 0.168±0.00 N/A
ENST00000358991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405974 0.264±0.00 N/A N/A N/A 0.318±0.00 N/A N/A N/A 0.084±0.00 0.628±0.00 N/A 0.085±0.00 N/A N/A
ENST00000409213 N/A N/A 1.184±0.00 0.839±0.16 N/A 0.072±0.00 0.808±0.00 N/A 0.387±0.00 N/A 0.235±0.00 0.486±0.00 N/A 0.279±0.00
ENST00000409261 0.068±0.00 0.126±0.00 1.040±0.00 0.820±0.00 0.305±0.09 0.043±0.00 0.513±0.00 0.767±0.00 0.065±0.00 3.315±0.57 0.010±0.00 0.170±0.07 0.404±0.24 0.561±0.13
ENST00000427594 N/A N/A N/A N/A 0.497±0.00 N/A 0.705±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000473859 N/A N/A N/A N/A N/A N/A N/A N/A 0.682±0.00 N/A N/A N/A N/A N/A
ENSG00000200708 ENST00000363838 N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222068 ENST00000410136 N/A N/A 0.408±0.00 1.654±0.00 N/A 2.037±0.00 0.308±0.12 0.354±0.00 N/A 4.682±0.00 N/A N/A N/A N/A
ENSG00000223430 ENST00000420184 N/A N/A N/A N/A 0.485±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226953 ENST00000432414 N/A N/A N/A 0.810±0.00 1.279±0.00 N/A N/A N/A 0.068±0.00 N/A N/A 0.069±0.00 0.196±0.13 0.069±0.00
ENST00000454699 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A N/A N/A
ENST00000606428 N/A 0.221±0.00 N/A 0.320±0.00 0.194±0.00 0.052±0.00 N/A 0.196±0.00 N/A N/A N/A 0.050±0.00 0.094±0.00 0.328±0.00
ENSG00000228721 ENST00000415916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00
ENSG00000232474 ENST00000416437 N/A 0.055±0.00 0.875±0.00 N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000233729 ENST00000424510 N/A N/A N/A 0.054±0.05 0.047±0.04 0.104±0.00 0.221±0.00 0.029±0.00 0.033±0.00 N/A N/A 0.087±0.00 0.063±0.00 1.862±0.13
ENSG00000234060 ENST00000415977 N/A N/A 0.374±0.00 0.078±0.05 N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A
ENSG00000279512 ENST00000623763 N/A N/A 0.303±0.00 0.079±0.01 0.162±0.00 0.323±0.00 0.136±0.07 0.471±0.00 0.435±0.41 2.487±0.00 N/A 0.276±0.45 N/A 0.012±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036155 ENSMUST00000038361 3.581±1.66 2.316±0.43 5.669±1.32 10.161±3.67 3.078±1.08 12.341±1.75 1.978±0.80 4.779±1.12 0.771±0.32 3.158±0.70 0.108±0.04 5.940±1.78 5.183±3.09 2.108±2.07
ENSMUST00000171405 N/A N/A N/A 7.980±0.00 N/A N/A N/A N/A N/A N/A N/A 4.993±0.00 5.994±0.16 2.773±0.26
ENSMUST00000189427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049690 ENSMUST00000057846 0.272±0.15 N/A N/A 0.396±0.00 0.159±0.05 0.389±0.00 N/A N/A 0.049±0.00 N/A 0.078±0.00 1.799±0.73 0.199±0.14 0.247±0.15
ENSMUST00000094609 N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A
ENSMUST00000094610 N/A 9.713±0.96 N/A N/A 0.766±0.14 1.074±0.15 N/A 1.117±0.01 0.363±0.13 19.978±0.00 N/A N/A N/A 0.591±0.00
ENSMUST00000112583 0.216±0.00 0.734±0.00 0.510±0.00 0.225±0.00 0.221±0.10 N/A 0.289±0.00 N/A 0.068±0.04 N/A 0.079±0.00 1.693±0.70 N/A N/A
ENSMUST00000159934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160693 N/A N/A N/A N/A N/A 1.149±0.00 N/A N/A 0.314±0.09 N/A N/A N/A N/A N/A
ENSMUST00000160736 N/A N/A N/A N/A 0.966±0.03 N/A N/A 1.593±0.00 N/A N/A 0.198±0.00 N/A N/A N/A
ENSMUST00000161954 0.189±0.10 1.424±0.67 0.309±0.00 3.694±0.63 N/A 0.315±0.00 0.750±0.00 0.147±0.01 0.090±0.07 9.499±1.73 0.158±0.02 0.485±0.10 0.129±0.04 0.333±0.00
ENSMUST00000162646 N/A N/A N/A N/A 0.458±0.00 0.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162664 N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162877 N/A N/A N/A N/A N/A 0.371±0.00 N/A N/A 0.103±0.04 N/A 0.053±0.02 1.112±0.00 N/A 0.495±0.00
ENSMUSG00000099471 ENSMUST00000170338 0.245±0.10 N/A 11.424±0.47 3.237±2.55 0.280±0.07 0.566±0.15 0.192±0.09 0.294±0.19 3.289±5.77 0.260±0.10 0.336±0.08 0.542±0.29 0.331±0.06 0.188±0.09
ENSMUSG00000101600 ENSMUST00000186724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.22
ENSMUST00000188266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.644±0.30

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