C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001W8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150551-ENSG00000176771 CGP 9606 2:132644853-133568463
GeneTranscriptPositionBiotype
ENSG00000150551 (LYPD1)
LY6/PLAUR domain containing 1 		ENST00000345008 (LYPD1-002) 132645787-132671579 protein_coding
ENST00000397463 (LYPD1-001) 132644853-132670205 protein_coding
ENST00000449209 (LYPD1-003) 132663026-132670200 nonsense_mediated_decay
ENSG00000176771 (NCKAP5)
NCK-associated protein 5 		ENST00000317721 (NCKAP5-201) 132671800-133568460 protein_coding
ENST00000358991 (NCKAP5-005) 133213716-133527185 protein_coding
ENST00000405974 (NCKAP5-202) 132671800-133568460 protein_coding
ENST00000409213 (NCKAP5-002) 132673049-133568463 protein_coding
ENST00000409261 (NCKAP5-001) 132671799-133568460 protein_coding
ENST00000427594 (NCKAP5-004) 133121969-133517513 protein_coding
ENST00000473859 (NCKAP5-003) 132731949-132782023 processed_transcript
ENSG00000183840 (GPR39)
G protein-coupled receptor 39 		ENST00000329321 (GPR39-001) 132416574-132646559 protein_coding
ENST00000470071 (GPR39-002) 132604441-132646554 processed_transcript
ENST00000622084 (GPR39-201) 132417043-132418529 protein_coding
ENSG00000222068 (RN7SKP154)
RNA, 7SK small nuclear pseudogene 154 		ENST00000410136 (RN7SKP154-201) 133391109-133391398 misc_RNA
ENSG00000223430 (AC011243.1)
 ENST00000420184 (AC011243.1-001) 133554315-133558227 lincRNA
ENSG00000226953 (AC010890.1)
 ENST00000432414 (AC010890.1-003) 133266195-133284762 antisense
ENST00000454699 (AC010890.1-002) 133264968-133269010 antisense
ENST00000606428 (AC010890.1-004) 133266242-133269041 antisense
ENSG00000228721 (AC016909.2)
 ENST00000415916 (AC016909.2-001) 132911096-132911261 processed_pseudogene
ENSG00000230065 (AC010974.3)
 ENST00000450509 (AC010974.3-001) 132660526-132666990 antisense
ENSG00000232474 (NCKAP5-IT1)
NCKAP5 intronic transcript 1 (non-protein coding) 		ENST00000416437 (NCKAP5-IT1-001) 133431666-133433897 sense_intronic
ENSG00000233729 (AC016909.1)
 ENST00000424510 (AC016909.1-001) 132915557-132931494 antisense
ENSG00000279512 (RP11-575M22.1)
 ENST00000623763 (RP11-575M22.1-001) 133117004-133119052 TEC
CIL_0001W8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026344-ENSMUSG00000049690 CGP 10090 1:125867622-126830799
GeneTranscriptPositionBiotype
ENSMUSG00000026343 (Gpr39)
G protein-coupled receptor 39 		ENSMUST00000027581 (Gpr39-001) 125676995-125873862 protein_coding
ENSMUST00000159359 (Gpr39-002) 125840003-125873173 processed_transcript
ENSMUSG00000026344 (Lypd1)
Ly6/Plaur domain containing 1 		ENSMUST00000027582 (Lypd1-002) 125872318-125912928 protein_coding
ENSMUST00000159417 (Lypd1-001) 125867622-125912214 protein_coding
ENSMUST00000159529 (Lypd1-004) 125873101-125910908 protein_coding
ENSMUST00000161361 (Lypd1-005) 125873519-125913101 protein_coding
ENSMUST00000162899 (Lypd1-003) 125872284-125911387 protein_coding
ENSMUSG00000049690 (Nckap5)
NCK-associated protein 5 		ENSMUST00000057846 (Nckap5-003) 125914743-126448456 protein_coding
ENSMUST00000094609 (Nckap5-201) 125913637-126830632 protein_coding
ENSMUST00000094610 (Nckap5-005) 125914960-126023103 protein_coding
ENSMUST00000112583 (Nckap5-202) 125913637-126830632 protein_coding
ENSMUST00000159934 (Nckap5-004) 126027877-126035125 processed_transcript
ENSMUST00000160693 (Nckap5-008) 126258401-126738202 protein_coding
ENSMUST00000160736 (Nckap5-006) 125914319-125965200 processed_transcript
ENSMUST00000161954 (Nckap5-001) 125913620-126492927 protein_coding
ENSMUST00000162646 (Nckap5-007) 126222627-126830799 protein_coding
ENSMUST00000162647 (Nckap5-010) 126527540-126830481 retained_intron
ENSMUST00000162664 (Nckap5-009) 126525039-126738190 retained_intron
ENSMUST00000162877 (Nckap5-002) 125913648-126492742 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W8_0001ENSG00000150551ENST00000345008ENST00000397463ENST00000449209ENSG00000176771ENST00000317721ENST00000358991ENST00000405974ENST00000409213ENST00000409261ENST00000427594ENST00000473859ENSG00000183840ENST00000329321ENST00000470071ENST00000622084ENSG00000222068ENST00000410136ENSG00000223430ENST00000420184ENSG00000226953ENST00000432414ENST00000454699ENST00000606428ENSG00000228721ENST00000415916ENSG00000230065ENST00000450509ENSG00000232474ENST00000416437ENSG00000233729ENST00000424510ENSG00000279512ENST00000623763CIL_0001W8_0002ENSMUSG00000026343ENSMUST00000027581ENSMUST00000159359ENSMUSG00000026344ENSMUST00000027582ENSMUST00000159417ENSMUST00000159529ENSMUST00000161361ENSMUST00000162899ENSMUSG00000049690ENSMUST00000057846ENSMUST00000094609ENSMUST00000094610ENSMUST00000112583ENSMUST00000159934ENSMUST00000160693ENSMUST00000160736ENSMUST00000161954ENSMUST00000162646ENSMUST00000162647ENSMUST00000162664ENSMUST00000162877
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150551 ENST00000345008 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A
ENST00000397463 N/A 0.466±0.00 0.926±0.00 3.770±0.85 0.359±0.14 2.659±2.23 0.014±0.00 2.097±1.63 1.248±0.83 1.038±0.73 N/A 7.202±6.07 0.260±0.00 5.772±1.56
ENST00000449209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176771 ENST00000317721 0.109±0.00 N/A N/A N/A 0.215±0.00 0.047±0.00 N/A 0.484±0.00 0.073±0.00 N/A 0.010±0.00 0.163±0.06 0.168±0.00 N/A
ENST00000358991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405974 0.264±0.00 N/A N/A N/A 0.318±0.00 N/A N/A N/A 0.084±0.00 0.628±0.00 N/A 0.085±0.00 N/A N/A
ENST00000409213 N/A N/A 1.184±0.00 0.839±0.16 N/A 0.072±0.00 0.808±0.00 N/A 0.387±0.00 N/A 0.235±0.00 0.486±0.00 N/A 0.279±0.00
ENST00000409261 0.068±0.00 0.126±0.00 1.040±0.00 0.820±0.00 0.305±0.09 0.043±0.00 0.513±0.00 0.767±0.00 0.065±0.00 3.315±0.57 0.010±0.00 0.170±0.07 0.404±0.24 0.561±0.13
ENST00000427594 N/A N/A N/A N/A 0.497±0.00 N/A 0.705±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000473859 N/A N/A N/A N/A N/A N/A N/A N/A 0.682±0.00 N/A N/A N/A N/A N/A
ENSG00000183840 ENST00000329321 N/A N/A N/A N/A 0.080±0.01 N/A N/A 0.770±0.20 0.453±0.31 0.443±0.00 N/A 1.941±0.58 0.063±0.01 0.994±0.09
ENST00000470071 N/A N/A 0.129±0.00 N/A N/A N/A 0.037±0.00 N/A N/A 0.235±0.00 0.465±0.00 N/A N/A N/A
ENST00000622084 0.026±0.00 N/A N/A N/A 0.631±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222068 ENST00000410136 N/A N/A 0.408±0.00 1.654±0.00 N/A 2.037±0.00 0.308±0.12 0.354±0.00 N/A 4.682±0.00 N/A N/A N/A N/A
ENSG00000223430 ENST00000420184 N/A N/A N/A N/A 0.485±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226953 ENST00000432414 N/A N/A N/A 0.810±0.00 1.279±0.00 N/A N/A N/A 0.068±0.00 N/A N/A 0.069±0.00 0.196±0.13 0.069±0.00
ENST00000454699 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A N/A N/A
ENST00000606428 N/A 0.221±0.00 N/A 0.320±0.00 0.194±0.00 0.052±0.00 N/A 0.196±0.00 N/A N/A N/A 0.050±0.00 0.094±0.00 0.328±0.00
ENSG00000228721 ENST00000415916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00
ENSG00000230065 ENST00000450509 N/A N/A N/A N/A N/A N/A N/A N/A 1.029±0.00 N/A N/A N/A N/A 0.699±0.00
ENSG00000232474 ENST00000416437 N/A 0.055±0.00 0.875±0.00 N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000233729 ENST00000424510 N/A N/A N/A 0.054±0.05 0.047±0.04 0.104±0.00 0.221±0.00 0.029±0.00 0.033±0.00 N/A N/A 0.087±0.00 0.063±0.00 1.862±0.13
ENSG00000279512 ENST00000623763 N/A N/A 0.303±0.00 0.079±0.01 0.162±0.00 0.323±0.00 0.136±0.07 0.471±0.00 0.435±0.41 2.487±0.00 N/A 0.276±0.45 N/A 0.012±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026343 ENSMUST00000027581 0.862±0.56 N/A 10.557±4.16 N/A 0.208±0.04 3.258±0.49 0.344±0.09 1.008±0.17 1.532±0.36 1.817±0.13 N/A 2.155±0.64 0.531±0.48 N/A
ENSMUST00000159359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026344 ENSMUST00000027582 1.170±0.00 N/A 9.764±1.84 14.473±5.04 0.153±0.01 4.485±0.80 0.899±0.05 1.441±0.37 1.508±0.46 2.077±0.21 0.036±0.01 2.921±0.95 1.109±0.93 4.501±2.07
ENSMUST00000159417 0.100±0.04 1.859±0.69 N/A 3.678±1.78 0.076±0.04 N/A 0.093±0.00 N/A N/A N/A N/A 0.537±0.30 0.018±0.00 N/A
ENSMUST00000159529 N/A N/A N/A 7.174±0.99 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162899 1.617±0.89 N/A 20.778±0.00 3.411±0.66 0.355±0.14 2.723±0.65 0.948±0.05 1.248±0.32 1.604±0.63 1.179±0.03 N/A 3.639±1.60 N/A N/A
ENSMUSG00000049690 ENSMUST00000057846 0.272±0.15 N/A N/A 0.396±0.00 0.159±0.05 0.389±0.00 N/A N/A 0.049±0.00 N/A 0.078±0.00 1.799±0.73 0.199±0.14 0.247±0.15
ENSMUST00000094609 N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A
ENSMUST00000094610 N/A 9.713±0.96 N/A N/A 0.766±0.14 1.074±0.15 N/A 1.117±0.01 0.363±0.13 19.978±0.00 N/A N/A N/A 0.591±0.00
ENSMUST00000112583 0.216±0.00 0.734±0.00 0.510±0.00 0.225±0.00 0.221±0.10 N/A 0.289±0.00 N/A 0.068±0.04 N/A 0.079±0.00 1.693±0.70 N/A N/A
ENSMUST00000159934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160693 N/A N/A N/A N/A N/A 1.149±0.00 N/A N/A 0.314±0.09 N/A N/A N/A N/A N/A
ENSMUST00000160736 N/A N/A N/A N/A 0.966±0.03 N/A N/A 1.593±0.00 N/A N/A 0.198±0.00 N/A N/A N/A
ENSMUST00000161954 0.189±0.10 1.424±0.67 0.309±0.00 3.694±0.63 N/A 0.315±0.00 0.750±0.00 0.147±0.01 0.090±0.07 9.499±1.73 0.158±0.02 0.485±0.10 0.129±0.04 0.333±0.00
ENSMUST00000162646 N/A N/A N/A N/A 0.458±0.00 0.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162664 N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162877 N/A N/A N/A N/A N/A 0.371±0.00 N/A N/A 0.103±0.04 N/A 0.053±0.02 1.112±0.00 N/A 0.495±0.00

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