C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SERTA domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049800 Sertad2 10090 + 11:20543253-20653021 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093292 Sertad2-001 20543334-20653021 protein_coding
  ENSMUST00000109585 Sertad2-002 20647155-20649065 protein_coding
  ENSMUST00000109586 Sertad2-003 20631979-20653021 protein_coding
  ENSMUST00000145328 Sertad2-004 20543253-20597020 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093292ENSMUST00000109585ENSMUST00000109586ENSMUST00000145328
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093292 N/A N/A 0.766±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.174±0.73 6.289±1.19
ENSMUST00000109585 N/A N/A N/A N/A 3.140±0.20 5.840±0.00 N/A 3.942±0.00 N/A N/A N/A 3.681±0.00 N/A 25.185±7.58
ENSMUST00000109586 5.898±1.75 5.286±0.28 5.413±0.39 2.446±1.24 6.975±1.81 12.512±2.23 5.372±0.19 8.318±0.38 6.646±3.30 15.945±1.38 2.725±0.33 8.899±3.19 4.590±2.12 8.748±4.86
ENSMUST00000145328 N/A 2.592±0.33 N/A N/A 4.862±1.03 5.863±0.88 N/A 5.009±0.00 N/A 12.302±0.00 N/A 10.163±1.64 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OP CIL_0004OP_0002 CGP 11:20302180-20653021

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 ISA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0030308 ISA negative regulation of cell growth
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055530 sertad2b SERTA domain containing 2b protein_coding Danio_rerio
ENSG00000179833 SERTAD2 SERTA domain containing 2 protein_coding Homo_sapiens

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