C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SERTA domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109586 Sertad2-003 ENSMUSG00000049800 10090 + 11:20631979-20653021 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109586
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109586 5.898±1.75 5.286±0.28 5.413±0.39 2.446±1.24 6.975±1.81 12.512±2.23 5.372±0.19 8.318±0.38 6.646±3.30 15.945±1.38 2.725±0.33 8.899±3.19 4.590±2.12 8.748±4.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OP CIL_0004OP_0002 CGP 11:20302180-20653021

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 ISA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0030308 ISA negative regulation of cell growth
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313349 SERTAD2-001 protein_coding Homo_sapiens 0 2146
ENST00000393640 ST3GAL2-001 protein_coding Homo_sapiens 0.000001 62
ENST00000476805 SERTAD2-002 processed_transcript Homo_sapiens 0 451

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