C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hypermethylated in cancer 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050240 Hic2 10090 + 16:17233572-17263430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090190 Hic2-001 17233572-17263430 protein_coding
  ENSMUST00000115698 Hic2-002 17233664-17261595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090190
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090190 0.192±0.05 0.196±0.02 1.095±0.08 1.092±0.63 0.210±0.11 0.705±0.32 0.062±0.00 0.092±0.01 0.658±0.48 0.132±0.02 0.161±0.04 0.478±0.19 6.776±1.18 0.272±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0002 VISTA 16:16870677-17470725
CIL_0002X8 CIL_0002X8_0002 CGP 16:17208135-17263430

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 ISS nucleus
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008022 IEA protein C-terminus binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045660 hic1l hypermethylated in cancer 1 like protein_coding Danio_rerio
ENSG00000169635 HIC2 hypermethylated in cancer 2 protein_coding Homo_sapiens

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