C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hypermethylated in cancer 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090190 Hic2-001 ENSMUSG00000050240 10090 + 16:17233572-17263430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090190
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090190 0.192±0.05 0.196±0.02 1.095±0.08 1.092±0.63 0.210±0.11 0.705±0.32 0.062±0.00 0.092±0.01 0.658±0.48 0.132±0.02 0.161±0.04 0.478±0.19 6.776±1.18 0.272±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0002 VISTA 16:16870677-17470725
CIL_0002X8 CIL_0002X8_0002 CGP 16:17208135-17263430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 ISS nucleus
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008022 IEA protein C-terminus binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000067138 hic1l-001 protein_coding Danio_rerio 0 226
ENST00000407464 HIC2-003 protein_coding Homo_sapiens 0 1973
ENST00000407598 HIC2-002 protein_coding Homo_sapiens 0 1971
ENST00000443632 HIC2-001 protein_coding Homo_sapiens 0 1971

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