C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence AI314180
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050812 AI314180 10090 - 4:58798911-58912749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055822 AI314180-002 58860796-58912749 protein_coding
  ENSMUST00000102889 AI314180-001 58798911-58912749 protein_coding
  ENSMUST00000107557 AI314180-005 58830554-58911927 protein_coding
  ENSMUST00000131611 AI314180-011 58815296-58819601 processed_transcript
  ENSMUST00000134848 AI314180-010 58869539-58911902 protein_coding
  ENSMUST00000135601 AI314180-008 58819352-58834064 processed_transcript
  ENSMUST00000142102 AI314180-009 58832706-58834913 processed_transcript
  ENSMUST00000144512 AI314180-003 58844151-58912704 protein_coding
  ENSMUST00000149301 AI314180-004 58811431-58911930 protein_coding
  ENSMUST00000149513 AI314180-006 58810625-58811842 processed_transcript
  ENSMUST00000151869 AI314180-007 58836072-58844881 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055822ENSMUST00000102889ENSMUST00000149301
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055822 6.469±0.00 45.678±7.31 N/A N/A 14.713±9.15 21.266±4.88 N/A 4.555±0.00 3.287±0.00 11.518±2.79 N/A 28.105±13.45 N/A N/A
ENSMUST00000102889 5.344±0.31 3.316±0.22 7.391±0.83 3.385±0.51 4.766±1.61 5.696±1.15 5.068±0.40 3.648±1.30 4.597±2.34 5.281±0.82 18.960±1.37 8.391±3.53 6.060±3.02 3.578±1.31
ENSMUST00000149301 2.668±0.42 N/A N/A 4.454±0.00 6.286±3.86 N/A 4.862±1.79 1.639±0.29 1.998±0.17 2.079±0.00 N/A 4.499±0.00 4.036±1.08 2.224±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093E CIL_00093E_0002 VISTA 4:58366631-58972430
CIL_00016M CIL_00016M_0002 CGP 4:58784779-58912749
CIL_0005XL CIL_0005XL_0002 CGP 4:58798911-58958355

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005634 IEA nucleus
GO:0005771 ISS multivesicular body
GO:0005783 IEA endoplasmic reticulum
GO:0005856 IEA cytoskeleton
GO:0030139 ISS endocytic vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061952 fbxo10 F-box protein 10 protein_coding Danio_rerio
ENSG00000136813 KIAA0368 KIAA0368 protein_coding Homo_sapiens

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