C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00093E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1447 VISTA 9606 9:110861070-111465765
GeneTranscriptPositionBiotype
ENSG00000171133 (OR2K2)
olfactory receptor, family 2, subfamily K, member 2 		ENST00000302681 (OR2K2-001) 111327483-111328433 protein_coding
ENST00000374428 (OR2K2-201) 111327483-111328520 protein_coding
ENSG00000198121 (LPAR1)
lysophosphatidic acid receptor 1 		ENST00000358883 (LPAR1-003) 110874177-111038085 protein_coding
ENST00000374430 (LPAR1-002) 110873778-110999466 protein_coding
ENST00000374431 (LPAR1-001) 110873263-111038043 protein_coding
ENST00000441240 (LPAR1-004) 110941668-111038458 protein_coding
ENST00000541779 (LPAR1-201) 110874321-111036207 protein_coding
ENSG00000206923 (RNU6-432P)
RNA, U6 small nuclear 432, pseudogene 		ENST00000384196 (RNU6-432P-201) 110903337-110903445 snRNA
ENSG00000223238 (RNA5SP294)
RNA, 5S ribosomal pseudogene 294 		ENST00000411306 (RNA5SP294-201) 111411644-111411742 rRNA
ENSG00000227531 (RP11-202G18.1)
 ENST00000426204 (RP11-202G18.1-001) 111139246-111284836 lincRNA
CIL_00093E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1447 VISTA 10090 4:58366631-58972430
GeneTranscriptPositionBiotype
ENSMUSG00000028378 (Ptgr1)
prostaglandin reductase 1 		ENSMUST00000030069 (Ptgr1-001) 58965439-58987119 protein_coding
ENSMUSG00000038630 (Zkscan16)
zinc finger with KRAB and SCAN domains 16 		ENSMUST00000107554 (Zkscan16-001) 58943628-58958355 protein_coding
ENSMUSG00000038668 (Lpar1)
lysophosphatidic acid receptor 1 		ENSMUST00000055018 (Lpar1-001) 58435255-58553357 protein_coding
ENSMUST00000107570 (Lpar1-005) 58435255-58499403 protein_coding
ENSMUST00000107571 (Lpar1-002) 58435255-58553311 protein_coding
ENSMUST00000107574 (Lpar1-004) 58435255-58553628 protein_coding
ENSMUST00000107575 (Lpar1-003) 58435255-58553553 protein_coding
ENSMUST00000145361 (Lpar1-007) 58487134-58553184 protein_coding
ENSMUST00000147354 (Lpar1-006) 58487100-58553898 protein_coding
ENSMUST00000155170 (Lpar1-008) 58487045-58548401 protein_coding
ENSMUSG00000043385 (Olfr267)
olfactory receptor 267 		ENSMUST00000059608 (Olfr267-001) 58784779-58785720 protein_coding
ENSMUSG00000050812 (AI314180)
expressed sequence AI314180 		ENSMUST00000055822 (AI314180-002) 58860796-58912749 protein_coding
ENSMUST00000102889 (AI314180-001) 58798911-58912749 protein_coding
ENSMUST00000107557 (AI314180-005) 58830554-58911927 protein_coding
ENSMUST00000131611 (AI314180-011) 58815296-58819601 processed_transcript
ENSMUST00000134848 (AI314180-010) 58869539-58911902 protein_coding
ENSMUST00000135601 (AI314180-008) 58819352-58834064 processed_transcript
ENSMUST00000142102 (AI314180-009) 58832706-58834913 processed_transcript
ENSMUST00000144512 (AI314180-003) 58844151-58912704 protein_coding
ENSMUST00000149301 (AI314180-004) 58811431-58911930 protein_coding
ENSMUST00000149513 (AI314180-006) 58810625-58811842 processed_transcript
ENSMUST00000151869 (AI314180-007) 58836072-58844881 processed_transcript
ENSMUSG00000057280 (Musk)
muscle, skeletal, receptor tyrosine kinase 		ENSMUST00000081919 (Musk-201) 58285960-58374302 protein_coding
ENSMUST00000084578 (Musk-002) 58285962-58374303 protein_coding
ENSMUST00000098057 (Musk-202) 58285962-58374303 protein_coding
ENSMUST00000098059 (Musk-203) 58285962-58374302 protein_coding
ENSMUST00000102893 (Musk-001) 58285962-58374303 protein_coding
ENSMUST00000135879 (Musk-003) 58286175-58304324 processed_transcript
ENSMUST00000177951 (Musk-204) 58285962-58374302 protein_coding
ENSMUST00000179951 (Musk-205) 58285962-58374302 protein_coding
ENSMUSG00000083145 (Gm12579)
predicted gene 12579 		ENSMUST00000118040 (Gm12579-001) 58611058-58611840 processed_pseudogene
ENSMUSG00000083834 (Gm12577)
predicted gene 12577 		ENSMUST00000119701 (Gm12577-001) 58483252-58483825 processed_pseudogene
ENSMUSG00000086470 (Gm12580)
predicted gene 12580 		ENSMUST00000127456 (Gm12580-001) 58648392-58658592 lincRNA
ENSMUSG00000093293 (Mir3095)
microRNA 3095 		ENSMUST00000175552 (Mir3095-201) 58441012-58441098 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00093E_0001ENSG00000171133ENST00000302681ENST00000374428ENSG00000198121ENST00000358883ENST00000374430ENST00000374431ENST00000441240ENST00000541779ENSG00000206923ENST00000384196ENSG00000223238ENST00000411306ENSG00000227531ENST00000426204CIL_00093E_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00093E_0001ENSG00000171133ENST00000302681ENST00000374428ENSG00000198121ENST00000358883ENST00000374430ENST00000374431ENST00000441240ENST00000541779ENSG00000206923ENST00000384196ENSG00000223238ENST00000411306ENSG00000227531ENST00000426204CIL_00093E_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171133 ENST00000302681 N/A N/A N/A 0.111±0.00 N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A N/A 0.054±0.00
ENST00000374428 N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198121 ENST00000358883 N/A N/A 2.121±0.00 N/A 3.302±0.00 N/A 1.161±0.00 0.531±0.00 4.854±0.00 1.681±0.00 0.647±0.00 2.069±0.00 1.520±0.00 N/A
ENST00000374430 N/A N/A N/A 8.739±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374431 3.697±0.00 15.311±0.00 N/A 7.903±4.23 0.904±0.00 12.812±10.24 1.987±0.00 2.883±2.76 1.426±0.00 4.381±0.00 2.231±0.00 1.903±1.70 6.438±0.77 6.598±3.68
ENST00000441240 N/A N/A N/A 12.566±0.00 3.991±0.00 8.234±0.00 1.962±0.00 N/A 13.988±0.00 7.348±0.00 2.265±0.00 4.162±0.00 N/A N/A
ENST00000541779 N/A N/A N/A N/A N/A N/A 0.877±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000206923 ENST00000384196 N/A 0.179±0.00 N/A N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000223238 ENST00000411306 N/A N/A N/A 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227531 ENST00000426204 0.073±0.00 0.045±0.00 N/A 0.015±0.00 0.128±0.00 N/A N/A 0.206±0.00 0.378±0.00 0.013±0.00 N/A 0.039±0.00 0.050±0.00 0.078±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028378 ENSMUST00000030069 2.906±0.97 2.707±0.85 22.275±10.85 0.964±0.57 1.037±0.64 4.752±1.37 0.849±0.35 2.089±0.24 3.167±2.64 6.713±2.07 0.307±0.07 4.359±2.48 6.638±6.32 3.723±1.71
ENSMUSG00000038630 ENSMUST00000107554 0.094±0.05 0.312±0.05 0.039±0.01 4.669±0.00 0.037±0.02 0.033±0.00 0.030±0.01 0.054±0.02 0.053±0.01 0.038±0.00 0.022±0.01 0.252±0.22 0.059±0.06 0.270±0.05
ENSMUSG00000038668 ENSMUST00000055018 16.699±9.57 8.577±2.80 18.390±4.37 3.019±0.80 15.762±4.27 28.520±3.61 3.841±1.44 4.139±0.31 0.529±0.27 10.578±1.15 0.732±0.31 8.670±4.98 2.802±2.20 4.449±0.82
ENSMUST00000107570 N/A N/A N/A 3.727±0.00 7.358±0.00 N/A N/A N/A 0.143±0.03 N/A 0.590±0.50 1.743±0.42 3.143±0.70 4.196±1.54
ENSMUST00000107571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.457±0.00 N/A N/A
ENSMUST00000107575 N/A N/A 2.150±0.00 N/A N/A N/A N/A 0.779±0.00 0.136±0.04 N/A 0.844±0.10 2.188±0.35 N/A N/A
ENSMUST00000145361 N/A 14.620±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043385 ENSMUST00000059608 0.051±0.00 N/A N/A 0.178±0.04 N/A 0.148±0.07 0.077±0.03 N/A 0.026±0.02 0.093±0.04 0.070±0.00 0.034±0.00 0.033±0.02 0.070±0.02
ENSMUSG00000050812 ENSMUST00000055822 6.469±0.00 45.678±7.31 N/A N/A 14.713±9.15 21.266±4.88 N/A 4.555±0.00 3.287±0.00 11.518±2.79 N/A 28.105±13.45 N/A N/A
ENSMUST00000102889 5.344±0.31 3.316±0.22 7.391±0.83 3.385±0.51 4.766±1.61 5.696±1.15 5.068±0.40 3.648±1.30 4.597±2.34 5.281±0.82 18.960±1.37 8.391±3.53 6.060±3.02 3.578±1.31
ENSMUST00000107557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149301 2.668±0.42 N/A N/A 4.454±0.00 6.286±3.86 N/A 4.862±1.79 1.639±0.29 1.998±0.17 2.079±0.00 N/A 4.499±0.00 4.036±1.08 2.224±0.80
ENSMUST00000149513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057280 ENSMUST00000081919 0.009±0.00 0.020±0.02 N/A N/A N/A N/A 0.029±0.00 0.035±0.01 0.004±0.00 0.015±0.00 N/A 0.045±0.00 N/A 0.080±0.06
ENSMUST00000084578 0.017±0.00 0.048±0.04 N/A 0.008±0.00 0.017±0.00 0.512±0.03 0.052±0.02 0.141±0.03 0.017±0.03 0.092±0.08 N/A 0.311±0.17 N/A 0.048±0.01
ENSMUST00000098057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000098059 N/A N/A N/A N/A N/A N/A 0.015±0.00 0.022±0.00 N/A N/A N/A 0.064±0.03 0.356±0.26 N/A
ENSMUST00000102893 0.041±0.03 0.029±0.02 N/A 0.024±0.01 0.169±0.13 0.992±0.28 N/A 0.133±0.00 0.005±0.00 0.167±0.17 N/A 0.221±0.16 0.189±0.18 0.073±0.03
ENSMUST00000135879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A 0.076±0.00
ENSMUST00000177951 N/A N/A N/A N/A N/A 0.282±0.00 0.057±0.00 0.121±0.01 N/A N/A N/A 0.208±0.10 0.042±0.02 N/A
ENSMUST00000179951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.354±0.00 N/A N/A
ENSMUSG00000083145 ENSMUST00000118040 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.015±0.00 0.458±0.00
ENSMUSG00000083834 ENSMUST00000119701 0.139±0.00 N/A 0.251±0.00 0.079±0.01 N/A N/A N/A N/A 0.076±0.08 N/A N/A 0.148±0.06 0.162±0.10 1.266±0.00
ENSMUSG00000086470 ENSMUST00000127456 0.043±0.02 0.143±0.05 0.056±0.00 0.010±0.01 N/A 0.151±0.00 0.064±0.00 N/A 0.011±0.01 0.049±0.02 0.017±0.00 0.136±0.13 0.022±0.01 0.058±0.03
ENSMUSG00000093293 ENSMUST00000175552 N/A N/A N/A N/A N/A 8243.840±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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