C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050840 Cdh20 10090 + 1:104768529-104995481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062528 Cdh20-001 104768529-104995481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062528
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062528 0.010±0.00 0.098±0.05 0.029±0.02 2.215±0.82 0.189±0.10 1.059±0.08 0.062±0.02 0.006±0.00 0.063±0.02 0.027±0.00 0.186±0.14 0.011±0.00 0.170±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FG CIL_0007FG_0002 CGP 1:104768529-105356710

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000101542 CDH20 cadherin 20, type 2 protein_coding Homo_sapiens

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