C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted pseudogene 6563
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051255 Gm6563 10090 + 19:23675844-23676712 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056396 Gm6563-201 23675844-23676712 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056396
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056396 0.428±0.26 0.323±0.00 0.250±0.14 2.530±3.20 0.662±0.42 0.358±0.17 0.483±0.18 0.334±0.16 0.801±0.44 0.552±0.17 0.112±0.06 0.702±0.39 0.829±1.13 1.544±2.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000346 ISS transcription export complex
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006406 ISS mRNA export from nucleus
GO:0006417 IEA regulation of translation
GO:0016607 ISS nuclear speck

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059357 sarnp SAP domain containing ribonucleoprotein protein_coding Danio_rerio
ENSG00000205323 SARNP SAP domain containing ribonucleoprotein protein_coding Homo_sapiens

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