C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidic acid phosphatase type 2 domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051373 Ppapdc3 10090 + 2:32095528-32110820 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057423 Ppapdc3-001 32095528-32110820 protein_coding
  ENSMUST00000140762 Ppapdc3-003 32095565-32110126 processed_transcript
  ENSMUST00000146502 Ppapdc3-002 32096155-32110808 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057423ENSMUST00000140762ENSMUST00000146502
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057423 2.743±0.80 5.108±0.37 2.285±0.06 4.603±2.30 7.803±8.28 1.093±0.17 14.409±2.07 1.727±0.40 0.664±0.35 1.660±0.09 50.261±4.11 6.735±2.54 1.252±1.02 1.403±0.29
ENSMUST00000140762 N/A 8.314±1.39 N/A 2.515±0.00 6.548±4.84 0.975±0.38 N/A N/A 0.261±0.10 1.200±0.26 N/A 5.840±1.68 N/A 0.900±0.00
ENSMUST00000146502 N/A N/A N/A 1.142±0.00 N/A 0.361±0.00 3.457±0.15 0.418±0.00 0.183±0.04 0.611±0.12 N/A 1.556±0.50 N/A 0.425±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586
CIL_0002VI CIL_0002VI_0003 CGP 2:32050055-32110820
CIL_0002ED CIL_0002ED_0003 CGP 2:32095528-32234537

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005635 IDA nuclear envelope
GO:0005783 IEA endoplasmic reticulum
GO:0008152 IEA metabolic process
GO:0010832 IGI negative regulation of myotube differentiation
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052033 PPAPDC3 (1 of 2) phosphatidic acid phosphatase type 2 domain containing 3 protein_coding Danio_rerio
ENSDARG00000075020 ppapdc3 phosphatidic acid phosphatase type 2 domain containing 3 protein_coding Danio_rerio
ENSG00000160539 PPAPDC3 phosphatidic acid phosphatase type 2 domain containing 3 protein_coding Homo_sapiens

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