C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002ED_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052033-ENSDARG00000079639 CGP 7955 5:75114248-75172795
GeneTranscriptPositionBiotype
ENSDARG00000052033 (PPAPDC3 (1 of 2))
phosphatidic acid phosphatase type 2 domain containing 3 		ENSDART00000073772 (PPAPDC3 (1 of 2)-201) 75114248-75117252 protein_coding
ENSDARG00000079639 (PRRC2B)
proline-rich coiled-coil 2B 		ENSDART00000112955 (PRRC2B-201) 75162511-75172795 protein_coding
CIL_0002ED_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160539-ENSG00000130723 CGP 9606 9:131289694-131500197
GeneTranscriptPositionBiotype
ENSG00000160539 (PPAPDC3)
phosphatidic acid phosphatase type 2 domain containing 3 		ENST00000372261 (PPAPDC3-002) 131289812-131291445 protein_coding
ENST00000372264 (PPAPDC3-001) 131289694-131309262 protein_coding
ENSG00000176868 (RP11-334J6.7)
 ENST00000321081 (RP11-334J6.7-201) 131498805-131500171 pseudogene
ENST00000616163 (RP11-334J6.7-001) 131497479-131500191 antisense
ENSG00000273751 (AL354855.1)
 ENST00000620698 (AL354855.1-201) 131322188-131322270 miRNA
CIL_0002ED_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051373-ENSMUSG00000039262 CGP 10090 2:32095528-32234537
GeneTranscriptPositionBiotype
ENSMUSG00000039262 (Prrc2b)
proline-rich coiled-coil 2B 		ENSMUST00000036691 (Prrc2b-001) 32151082-32234537 protein_coding
ENSMUST00000069817 (Prrc2b-201) 32151148-32234536 protein_coding
ENSMUST00000123270 (Prrc2b-004) 32206383-32219658 processed_transcript
ENSMUST00000128936 (Prrc2b-006) 32216078-32219612 protein_coding
ENSMUST00000129626 (Prrc2b-009) 32219530-32222319 processed_transcript
ENSMUST00000132459 (Prrc2b-002) 32183226-32231162 protein_coding
ENSMUST00000137551 (Prrc2b-003) 32208694-32234516 protein_coding
ENSMUST00000140015 (Prrc2b-008) 32217280-32221367 processed_transcript
ENSMUST00000141053 (Prrc2b-010) 32219768-32221435 processed_transcript
ENSMUST00000142219 (Prrc2b-007) 32217212-32219156 processed_transcript
ENSMUST00000156313 (Prrc2b-005) 32212198-32219317 protein_coding
ENSMUSG00000051373 (Ppapdc3)
phosphatidic acid phosphatase type 2 domain containing 3 		ENSMUST00000057423 (Ppapdc3-001) 32095528-32110820 protein_coding
ENSMUST00000140762 (Ppapdc3-003) 32095565-32110126 processed_transcript
ENSMUST00000146502 (Ppapdc3-002) 32096155-32110808 processed_transcript
ENSMUSG00000086216 (Gm13610)
predicted gene 13610 		ENSMUST00000128298 (Gm13610-001) 32232782-32236382 processed_transcript
ENSMUSG00000099155 (Gm27805)
predicted gene, 27805 		ENSMUST00000184513 (Gm27805-201) 32173171-32173249 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ED_0001ENSDARG00000052033ENSDART00000073772ENSDARG00000079639ENSDART00000112955CIL_0002ED_0002ENSG00000160539ENST00000372261ENST00000372264ENSG00000176868ENST00000321081ENST00000616163ENSG00000273751ENST00000620698CIL_0002ED_0003ENSMUSG00000039262ENSMUST00000036691ENSMUST00000069817ENSMUST00000123270ENSMUST00000128936ENSMUST00000129626ENSMUST00000132459ENSMUST00000137551ENSMUST00000140015ENSMUST00000141053ENSMUST00000142219ENSMUST00000156313ENSMUSG00000051373ENSMUST00000057423ENSMUST00000140762ENSMUST00000146502ENSMUSG00000086216ENSMUST00000128298ENSMUSG00000099155ENSMUST00000184513
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ED_0001ENSDARG00000052033ENSDART00000073772ENSDARG00000079639ENSDART00000112955CIL_0002ED_0002ENSG00000160539ENST00000372261ENST00000372264ENSG00000176868ENST00000321081ENST00000616163ENSG00000273751ENST00000620698CIL_0002ED_0003ENSMUSG00000039262ENSMUST00000036691ENSMUST00000069817ENSMUST00000132459ENSMUST00000137551ENSMUST00000140015ENSMUSG00000051373ENSMUST00000057423ENSMUST00000140762ENSMUST00000146502ENSMUSG00000086216ENSMUST00000128298ENSMUSG00000099155ENSMUST00000184513
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052033 ENSDART00000073772 N/A N/A N/A 0.884±0.00 N/A N/A 0.159±0.01 N/A N/A N/A 0.164±0.00 N/A N/A N/A
ENSDARG00000079639 ENSDART00000112955 N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160539 ENST00000372261 N/A N/A 1.437±0.00 N/A 0.889±0.00 0.531±0.00 1.292±0.00 N/A N/A 0.316±0.03 19.820±0.00 2.759±0.00 N/A 0.667±0.00
ENST00000372264 2.737±0.00 2.062±0.00 N/A 3.775±0.84 4.511±3.35 2.877±0.00 18.889±14.58 1.317±0.00 0.269±0.24 0.344±0.00 37.252±24.56 3.428±3.20 0.805±0.35 3.045±1.90
ENSG00000176868 ENST00000321081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.166±0.00 N/A N/A
ENST00000616163 25.257±0.00 21.888±0.00 2.949±0.00 15.982±11.93 15.726±12.13 15.984±12.84 7.994±6.88 28.609±0.00 7.366±3.26 14.012±11.25 6.752±5.46 21.632±15.26 13.598±2.00 15.324±7.12
ENSG00000273751 ENST00000620698 N/A N/A N/A N/A N/A N/A 0.770±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039262 ENSMUST00000036691 12.726±3.63 13.904±4.03 6.059±2.80 26.917±6.91 13.054±1.29 9.436±1.20 8.922±0.74 13.087±0.50 3.997±1.93 20.837±1.58 5.127±0.08 21.180±7.35 9.208±1.98 0.708±0.30
ENSMUST00000069817 N/A N/A N/A 31.564±15.16 3.021±0.00 4.114±0.00 1.616±0.00 N/A 1.206±0.22 N/A 17.718±3.47 11.238±5.79 7.308±2.62 0.716±0.04
ENSMUST00000123270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132459 N/A 14.565±3.02 N/A N/A 7.179±0.00 5.253±0.31 N/A N/A 2.255±0.53 6.907±0.00 N/A N/A 9.355±1.11 1.147±0.00
ENSMUST00000137551 9.259±2.10 15.445±3.92 6.897±1.63 20.301±4.16 10.216±2.11 5.023±0.71 7.449±1.26 6.150±0.31 1.769±0.50 12.655±0.96 5.730±0.47 14.011±3.25 4.260±0.26 0.648±0.07
ENSMUST00000140015 N/A N/A N/A 273.236±0.00 N/A N/A N/A N/A N/A N/A N/A 121.693±0.00 71.991±19.17 N/A
ENSMUST00000141053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000051373 ENSMUST00000057423 2.743±0.80 5.108±0.37 2.285±0.06 4.603±2.30 7.803±8.28 1.093±0.17 14.409±2.07 1.727±0.40 0.664±0.35 1.660±0.09 50.261±4.11 6.735±2.54 1.252±1.02 1.403±0.29
ENSMUST00000140762 N/A 8.314±1.39 N/A 2.515±0.00 6.548±4.84 0.975±0.38 N/A N/A 0.261±0.10 1.200±0.26 N/A 5.840±1.68 N/A 0.900±0.00
ENSMUST00000146502 N/A N/A N/A 1.142±0.00 N/A 0.361±0.00 3.457±0.15 0.418±0.00 0.183±0.04 0.611±0.12 N/A 1.556±0.50 N/A 0.425±0.10
ENSMUSG00000086216 ENSMUST00000128298 N/A N/A N/A N/A 19.114±0.00 N/A N/A N/A N/A N/A N/A 30.516±0.00 N/A 11.137±3.36
ENSMUSG00000099155 ENSMUST00000184513 N/A N/A N/A 296.419±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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