C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fibronectin leucine rich transmembrane protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051379 Flrt3 10090 - 2:140650914-140671469 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056760 Flrt3-002 140659325-140671400 protein_coding
  ENSMUST00000110057 Flrt3-001 140658198-140671469 protein_coding
  ENSMUST00000172544 Flrt3-003 140650914-140671450 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056760ENSMUST00000110057ENSMUST00000172544
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056760 0.125±0.03 0.319±0.12 N/A 2.116±0.84 0.435±0.31 N/A 0.062±0.00 0.131±0.01 0.032±0.01 N/A 0.012±0.00 0.400±0.21 0.556±0.00 0.403±0.32
ENSMUST00000110057 0.799±0.39 0.287±0.12 6.071±0.66 4.272±1.14 0.884±0.29 2.004±0.41 0.035±0.01 0.768±0.10 0.185±0.07 6.919±0.76 0.059±0.05 0.782±0.33 2.573±0.70 0.163±0.06
ENSMUST00000172544 N/A N/A N/A N/A N/A 1.258±0.08 0.144±0.11 N/A N/A N/A N/A 0.642±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DE CIL_0002DE_0002 CGP 2:140229855-142392966
CIL_0002DF CIL_0002DF_0002 CGP 2:140395309-142392966
CIL_0002DG CIL_0002DG_0002 CGP 2:140650914-142901531

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0007411 ISO axon guidance
GO:0016021 IEA integral component of membrane
GO:0045499 IDA chemorepellent activity
GO:0050919 IDA negative chemotaxis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076895 flrt3 fibronectin leucine rich transmembrane 3 protein_coding Danio_rerio
ENSG00000125848 FLRT3 fibronectin leucine rich transmembrane protein 3 protein_coding Homo_sapiens

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