C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fibronectin leucine rich transmembrane protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125848 FLRT3 9606 - 20:14322988-14337616 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341420 FLRT3-003 14323995-14337616 protein_coding
  ENST00000378053 FLRT3-001 14322988-14337608 protein_coding
  ENST00000462077 FLRT3-002 14328922-14337614 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341420ENST00000378053ENST00000462077
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341420 0.038±0.00 0.538±0.00 3.537±0.00 2.187±0.00 0.333±0.22 0.453±0.03 0.071±0.00 0.328±0.00 1.358±0.23 5.034±0.12 0.572±0.32 0.966±0.79 0.681±0.32 0.785±0.57
ENST00000378053 N/A 0.128±0.00 0.529±0.00 0.522±0.11 0.362±0.32 N/A 0.027±0.00 0.062±0.00 0.443±0.04 1.298±0.00 N/A 0.178±0.10 0.057±0.00 0.031±0.00
ENST00000462077 N/A N/A N/A N/A N/A N/A 0.090±0.00 0.868±0.00 N/A 9.192±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DE CIL_0002DE_0001 CGP 20:13849247-16053197
CIL_0002DF CIL_0002DF_0001 CGP 20:13995369-16053197
CIL_0002DG CIL_0002DG_0001 CGP 20:14322988-16573433

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005057 NAS receptor signaling protein activity
GO:0005515 IEA protein binding
GO:0005578 NAS proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0005887 NAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007411 IEA axon guidance
GO:0008150 ND biological_process
GO:0030674 NAS protein binding, bridging
GO:0035556 NAS intracellular signal transduction
GO:0045499 IEA chemorepellent activity
GO:0050919 IEA negative chemotaxis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076895 flrt3 fibronectin leucine rich transmembrane 3 protein_coding Danio_rerio
ENSMUSG00000051379 Flrt3 fibronectin leucine rich transmembrane protein 3 protein_coding Mus_musculus

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