C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sialophorin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051457 Spn 10090 - 7:127132232-127137823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049931 Spn-001 127133702-127137823 protein_coding
  ENSMUST00000143713 Spn-002 127132232-127137814 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049931ENSMUST00000143713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049931 1.004±0.28 0.295±0.10 0.627±0.10 0.038±0.01 7.300±2.46 0.966±0.27 0.510±0.33 1.100±0.44 3.971±3.96 4.528±0.46 0.210±0.34 0.871±0.29 5.171±4.43 0.033±0.01
ENSMUST00000143713 0.396±0.00 0.876±0.20 N/A N/A 6.417±5.82 0.546±0.09 0.246±0.12 0.681±0.20 0.204±0.09 1.568±0.26 N/A 0.729±0.36 N/A 0.046±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001562 IDA response to protozoan
GO:0001808 IMP negative regulation of type IV hypersensitivity
GO:0001931 IDA uropod
GO:0001934 IGI positive regulation of protein phosphorylation
GO:0005515 IPI protein binding
GO:0005604 IDA basement membrane
GO:0005615 IEA extracellular space
GO:0005887 IDA integral component of plasma membrane
GO:0007162 IMP negative regulation of cell adhesion
GO:0007166 IDA cell surface receptor signaling pathway
GO:0009897 IDA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0016020 IEA membrane
GO:0031295 IDA T cell costimulation
GO:0042102 IDA positive regulation of T cell proliferation
GO:0042130 IMP negative regulation of T cell proliferation
GO:0042535 IMP positive regulation of tumor necrosis factor biosynthetic process
GO:0042742 IMP defense response to bacterium
GO:0045060 IMP negative thymic T cell selection
GO:0050688 IMP regulation of defense response to virus
GO:0050776 IMP regulation of immune response
GO:0050868 IMP negative regulation of T cell activation
GO:0070062 IEA extracellular vesicular exosome
GO:0097190 IDA apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000197471 SPN sialophorin protein_coding Homo_sapiens

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