C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 32
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051675 Trim32 10090 + 4:65604986-65616238 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050850 Trim32-001 65604986-65616238 protein_coding
  ENSMUST00000107366 Trim32-002 65604986-65616238 protein_coding
  ENSMUST00000155978 Trim32-003 65605249-65613616 protein_coding
  ENSMUST00000156922 Trim32-004 65605249-65613756 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050850ENSMUST00000107366ENSMUST00000155978ENSMUST00000156922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050850 2.931±0.46 5.483±2.45 5.401±0.31 27.141±1.62 3.051±0.93 1.820±1.09 2.244±0.94 4.045±1.39 1.742±0.66 2.978±0.99 1.873±0.49 6.884±2.43 3.739±2.36 2.154±1.54
ENSMUST00000107366 2.861±0.45 2.857±1.24 3.290±0.56 12.586±1.43 1.299±0.35 3.077±1.17 2.077±0.29 2.266±0.33 0.890±0.28 1.143±0.26 1.037±0.23 6.864±3.51 1.618±0.43 1.279±0.17
ENSMUST00000155978 N/A 6.505±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156922 N/A 7.880±1.28 N/A N/A 5.492±1.36 6.451±1.16 N/A N/A N/A 4.953±1.16 N/A 15.293±2.88 N/A 2.948±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FO CIL_0004FO_0002 CGP 4:65124174-66404611
CIL_0004FP CIL_0004FP_0002 CGP 4:65380803-66404611
CIL_0004FM CIL_0004FM_0002 CGP 4:65604986-66930284

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0003723 IDA RNA binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 ISS cytoplasm
GO:0005863 IDA striated muscle myosin thick filament
GO:0008270 IEA zinc ion binding
GO:0009411 IDA response to UV
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0017022 IPI myosin binding
GO:0030307 ISS positive regulation of cell growth
GO:0030335 ISS positive regulation of cell migration
GO:0031369 IPI translation initiation factor binding
GO:0032897 IEA negative regulation of viral transcription
GO:0034612 IDA response to tumor necrosis factor
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 ISS ubiquitin binding
GO:0043621 ISS protein self-association
GO:0045444 IEP fat cell differentiation
GO:0045666 IDA positive regulation of neuron differentiation
GO:0045732 IDA positive regulation of protein catabolic process
GO:0045787 ISS positive regulation of cell cycle
GO:0045862 ISS positive regulation of proteolysis
GO:0048147 IEP negative regulation of fibroblast proliferation
GO:0050769 IDA positive regulation of neurogenesis
GO:0051091 IEA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IDA positive regulation of NF-kappaB transcription factor activity
GO:1902173 NAS negative regulation of keratinocyte apoptotic process
GO:1902187 IEA negative regulation of viral release from host cell
GO:1902230 ISS negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:2000147 IDA positive regulation of cell motility

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076553 trim32 tripartite motif-containing 32 protein_coding Danio_rerio
ENSG00000119401 TRIM32 tripartite motif containing 32 protein_coding Homo_sapiens

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