C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 32
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050850 Trim32-001 ENSMUSG00000051675 10090 + 4:65604986-65616238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050850
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050850 2.931±0.46 5.483±2.45 5.401±0.31 27.141±1.62 3.051±0.93 1.820±1.09 2.244±0.94 4.045±1.39 1.742±0.66 2.978±0.99 1.873±0.49 6.884±2.43 3.739±2.36 2.154±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FO CIL_0004FO_0002 CGP 4:65124174-66404611
CIL_0004FP CIL_0004FP_0002 CGP 4:65380803-66404611
CIL_0004FM CIL_0004FM_0002 CGP 4:65604986-66930284

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0003723 IDA RNA binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 ISS cytoplasm
GO:0005863 IDA striated muscle myosin thick filament
GO:0008270 IEA zinc ion binding
GO:0009411 IDA response to UV
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0017022 IPI myosin binding
GO:0030307 ISS positive regulation of cell growth
GO:0030335 ISS positive regulation of cell migration
GO:0031369 IPI translation initiation factor binding
GO:0032897 IEA negative regulation of viral transcription
GO:0034612 IDA response to tumor necrosis factor
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 ISS ubiquitin binding
GO:0043621 ISS protein self-association
GO:0045444 IEP fat cell differentiation
GO:0045666 IDA positive regulation of neuron differentiation
GO:0045732 IDA positive regulation of protein catabolic process
GO:0045787 ISS positive regulation of cell cycle
GO:0045862 ISS positive regulation of proteolysis
GO:0048147 IEP negative regulation of fibroblast proliferation
GO:0050769 IDA positive regulation of neurogenesis
GO:0051091 IEA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IDA positive regulation of NF-kappaB transcription factor activity
GO:1902173 NAS negative regulation of keratinocyte apoptotic process
GO:1902187 IEA negative regulation of viral release from host cell
GO:1902230 ISS negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:2000147 IDA positive regulation of cell motility

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373983 TRIM32-001 protein_coding Homo_sapiens 0 2540
ENST00000411410 TRIM32-002 protein_coding Homo_sapiens 0 664
ENST00000450136 TRIM32-201 protein_coding Homo_sapiens 0 2571

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