C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(rC) binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051695 Pcbp1 10090 - 6:86524492-86526321 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053015 Pcbp1-001 86524492-86526321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053015
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053015 36.406±29.36 111.969±18.37 67.401±27.14 51.243±5.68 53.243±31.50 85.108±7.14 14.914±2.76 74.382±4.68 100.038±48.74 64.045±3.76 57.010±2.89 133.903±21.85 148.420±57.78 42.745±7.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0002 VISTA 6:86179085-86780169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003697 IEA single-stranded DNA binding
GO:0003723 TAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006397 TAS mRNA processing
GO:0008494 TAS translation activator activity
GO:0016020 IEA membrane
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding
GO:0045727 TAS positive regulation of translation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013184 pcbp2 poly(rC) binding protein 2 protein_coding Danio_rerio
ENSG00000169564 PCBP1 poly(rC) binding protein 1 protein_coding Homo_sapiens

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