C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(rC) binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000013184 pcbp2 7955 + 9:220332-231565 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000025885 pcbp2-001 220332-231565 protein_coding
  ENSDART00000131317 pcbp2-004 220396-228524 protein_coding
  ENSDART00000139012 pcbp2-002 220380-226594 retained_intron
  ENSDART00000147127 pcbp2-003 224651-227630 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000025885ENSDART00000131317
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000025885 62.666±30.50 54.060±25.02 22.819±3.33 9.971±0.00 41.494±0.00
ENSDART00000131317 N/A N/A N/A 4.240±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033G CIL_00033G_0001 CGP 9:220332-265019

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000169564 PCBP1 poly(rC) binding protein 1 protein_coding Homo_sapiens
ENSG00000197111 PCBP2 poly(rC) binding protein 2 protein_coding Homo_sapiens
ENSMUSG00000051695 Pcbp1 poly(rC) binding protein 1 protein_coding Mus_musculus
ENSMUSG00000056851 Pcbp2 poly(rC) binding protein 2 protein_coding Mus_musculus

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