C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small integral membrane protein 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051989 Smim11 10090 + 16:92301286-92313041 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063641 Smim11-001 92301286-92313041 protein_coding
  ENSMUST00000118064 Smim11-002 92301296-92311424 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063641ENSMUST00000118064
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063641 13.955±1.14 83.390±5.45 31.379±4.55 21.735±10.47 18.522±7.04 30.527±9.08 28.402±9.13 20.593±2.57 17.899±5.95 15.760±3.09 47.610±3.53 41.825±19.53 72.782±68.52 5.310±2.49
ENSMUST00000118064 1.562±0.00 N/A N/A N/A 2.501±0.32 2.968±1.03 1.202±0.00 1.499±0.31 1.249±0.41 2.059±0.00 N/A 2.806±0.82 N/A 0.372±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0002 VISTA 16:92040534-92642015
CIL_0007SX CIL_0007SX_0002 VISTA 16:92042784-92648394
CIL_0008OM CIL_0008OM_0002 VISTA 16:92044467-92645647
CIL_0008ZS CIL_0008ZS_0002 VISTA 16:92110151-92716672
CIL_00094R CIL_00094R_0002 VISTA 16:92127453-92730131
CIL_000441 CIL_000441_0002 CGP 16:92292389-92313041
CIL_000786 CIL_000786_0002 CGP 16:92301286-92321441

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000205670 SMIM11 small integral membrane protein 11 protein_coding Homo_sapiens

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