C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAS protein activator like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052142 Rasal3 10090 - 17:32390659-32403583 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063824 Rasal3-001 32390659-32403583 protein_coding
  ENSMUST00000134723 Rasal3-009 32392639-32393726 retained_intron
  ENSMUST00000135560 Rasal3-006 32398800-32403581 retained_intron
  ENSMUST00000135618 Rasal3-005 32390924-32403581 protein_coding
  ENSMUST00000135968 Rasal3-007 32395567-32396709 retained_intron
  ENSMUST00000136375 Rasal3-004 32390661-32403559 nonsense_mediated_decay
  ENSMUST00000137458 Rasal3-002 32390973-32403537 protein_coding
  ENSMUST00000141714 Rasal3-010 32390917-32391508 retained_intron
  ENSMUST00000142203 Rasal3-003 32390670-32403568 retained_intron
  ENSMUST00000143808 Rasal3-008 32393923-32395371 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063824ENSMUST00000134723ENSMUST00000135560ENSMUST00000135618ENSMUST00000136375ENSMUST00000137458ENSMUST00000141714ENSMUST00000142203ENSMUST00000143808
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063824 0.509±0.34 N/A 0.269±0.00 0.110±0.00 4.124±0.00 N/A 0.410±0.10 0.920±0.45 0.538±0.19 0.786±0.00 0.035±0.02 0.311±0.05 0.082±0.01 0.539±0.00
ENSMUST00000134723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A
ENSMUST00000135560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A 0.080±0.00 N/A
ENSMUST00000135618 0.676±0.40 0.573±0.27 0.293±0.02 0.380±0.24 15.125±5.41 1.530±0.48 0.156±0.06 0.587±0.36 0.637±0.32 1.842±0.33 0.581±0.77 0.474±0.20 0.151±0.05 0.085±0.00
ENSMUST00000136375 N/A 0.137±0.00 N/A N/A N/A N/A 0.104±0.00 N/A 0.090±0.01 N/A N/A N/A N/A N/A
ENSMUST00000137458 0.381±0.00 0.335±0.00 N/A N/A N/A 0.804±0.00 N/A 0.353±0.00 0.339±0.09 0.908±0.06 0.007±0.00 0.409±0.14 0.063±0.03 N/A
ENSMUST00000141714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A 0.345±0.06 N/A
ENSMUST00000142203 N/A N/A 0.505±0.00 N/A 8.243±2.95 0.619±0.32 N/A 0.163±0.04 0.357±0.04 1.600±0.49 N/A 0.363±0.13 0.042±0.00 N/A
ENSMUST00000143808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.798±0.00 0.140±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IV CIL_0000IV_0002 CGP 17:32354055-32403583
CIL_00019W CIL_00019W_0002 CGP 17:32390659-32424167

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005099 IBA Ras GTPase activator activity
GO:0005737 IBA cytoplasm
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0031235 IBA intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032320 IBA positive regulation of Ras GTPase activity
GO:0046580 IBA negative regulation of Ras protein signal transduction
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089933 rasal3 RAS protein activator like 3 protein_coding Danio_rerio
ENSG00000105122 RASAL3 RAS protein activator like 3 protein_coding Homo_sapiens

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