C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00019W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105122-ENSG00000161031 CGP 9606 19:15451624-15498956
GeneTranscriptPositionBiotype
ENSG00000105122 (RASAL3)
RAS protein activator like 3
ENST00000343625 (RASAL3-001) 15451624-15464571 protein_coding
ENST00000595098 (RASAL3-005) 15456165-15456891 processed_transcript
ENST00000597025 (RASAL3-004) 15456376-15457319 retained_intron
ENST00000599694 (RASAL3-003) 15451658-15456599 protein_coding
ENST00000602101 (RASAL3-002) 15451624-15464514 retained_intron
ENST00000608577 (RASAL3-007) 15457469-15458117 processed_transcript
ENST00000609274 (RASAL3-006) 15451624-15454375 protein_coding
ENSG00000161031 (PGLYRP2)
peptidoglycan recognition protein 2
ENST00000292609 (PGLYRP2-002) 15468645-15479501 protein_coding
ENST00000340880 (PGLYRP2-001) 15468645-15479852 protein_coding
ENST00000594637 (PGLYRP2-004) 15476353-15479831 protein_coding
ENST00000601792 (PGLYRP2-003) 15476235-15498956 protein_coding
CIL_00019W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052142-ENSMUSG00000079563 CGP 10090 17:32390659-32424167
GeneTranscriptPositionBiotype
ENSMUSG00000052142 (Rasal3)
RAS protein activator like 3
ENSMUST00000063824 (Rasal3-001) 32390659-32403583 protein_coding
ENSMUST00000134723 (Rasal3-009) 32392639-32393726 retained_intron
ENSMUST00000135560 (Rasal3-006) 32398800-32403581 retained_intron
ENSMUST00000135618 (Rasal3-005) 32390924-32403581 protein_coding
ENSMUST00000135968 (Rasal3-007) 32395567-32396709 retained_intron
ENSMUST00000136375 (Rasal3-004) 32390661-32403559 nonsense_mediated_decay
ENSMUST00000137458 (Rasal3-002) 32390973-32403537 protein_coding
ENSMUST00000141714 (Rasal3-010) 32390917-32391508 retained_intron
ENSMUST00000142203 (Rasal3-003) 32390670-32403568 retained_intron
ENSMUST00000143808 (Rasal3-008) 32393923-32395371 retained_intron
ENSMUSG00000079563 (Pglyrp2)
peptidoglycan recognition protein 2
ENSMUST00000114455 (Pglyrp2-201) 32413361-32424167 protein_coding
ENSMUST00000170392 (Pglyrp2-202) 32413100-32420975 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019W_0001ENSG00000105122ENST00000343625ENST00000595098ENST00000597025ENST00000599694ENST00000602101ENST00000608577ENST00000609274ENSG00000161031ENST00000292609ENST00000340880ENST00000594637ENST00000601792CIL_00019W_0002ENSMUSG00000052142ENSMUST00000063824ENSMUST00000134723ENSMUST00000135560ENSMUST00000135618ENSMUST00000135968ENSMUST00000136375ENSMUST00000137458ENSMUST00000141714ENSMUST00000142203ENSMUST00000143808ENSMUSG00000079563ENSMUST00000114455ENSMUST00000170392
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00019W_0001ENSG00000105122ENST00000343625ENST00000599694ENST00000602101ENST00000608577ENST00000609274ENSG00000161031ENST00000292609ENST00000340880CIL_00019W_0002ENSMUSG00000052142ENSMUST00000063824ENSMUST00000134723ENSMUST00000135560ENSMUST00000135618ENSMUST00000136375ENSMUST00000137458ENSMUST00000141714ENSMUST00000142203ENSMUST00000143808ENSMUSG00000079563ENSMUST00000114455ENSMUST00000170392
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105122 ENST00000343625 1.458±0.00 9.981±0.00 0.176±0.00 0.366±0.00 1.012±0.30 0.311±0.00 0.134±0.00 0.651±0.00 0.420±0.01 1.661±0.84 N/A 0.688±0.36 1.679±0.94 0.235±0.11
ENST00000595098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599694 0.445±0.00 8.648±0.00 N/A N/A 0.647±0.00 N/A N/A 1.494±0.00 0.219±0.00 N/A N/A N/A N/A 0.882±0.00
ENST00000602101 0.187±0.00 3.335±0.00 N/A 0.189±0.00 N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.277±0.00
ENST00000608577 N/A N/A N/A N/A N/A 0.440±0.00 N/A N/A N/A N/A N/A N/A N/A 0.899±0.00
ENST00000609274 N/A N/A N/A N/A N/A N/A 0.172±0.00 0.255±0.00 N/A N/A 0.243±0.00 N/A N/A 0.257±0.00
ENSG00000161031 ENST00000292609 N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A 0.015±0.00 N/A N/A N/A 0.479±0.31
ENST00000340880 N/A 0.126±0.00 N/A 0.025±0.00 0.080±0.04 N/A N/A 5.118±0.00 N/A N/A N/A 0.028±0.00 N/A N/A
ENST00000594637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052142 ENSMUST00000063824 0.509±0.34 N/A 0.269±0.00 0.110±0.00 4.124±0.00 N/A 0.410±0.10 0.920±0.45 0.538±0.19 0.786±0.00 0.035±0.02 0.311±0.05 0.082±0.01 0.539±0.00
ENSMUST00000134723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A
ENSMUST00000135560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A 0.080±0.00 N/A
ENSMUST00000135618 0.676±0.40 0.573±0.27 0.293±0.02 0.380±0.24 15.125±5.41 1.530±0.48 0.156±0.06 0.587±0.36 0.637±0.32 1.842±0.33 0.581±0.77 0.474±0.20 0.151±0.05 0.085±0.00
ENSMUST00000135968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136375 N/A 0.137±0.00 N/A N/A N/A N/A 0.104±0.00 N/A 0.090±0.01 N/A N/A N/A N/A N/A
ENSMUST00000137458 0.381±0.00 0.335±0.00 N/A N/A N/A 0.804±0.00 N/A 0.353±0.00 0.339±0.09 0.908±0.06 0.007±0.00 0.409±0.14 0.063±0.03 N/A
ENSMUST00000141714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A 0.345±0.06 N/A
ENSMUST00000142203 N/A N/A 0.505±0.00 N/A 8.243±2.95 0.619±0.32 N/A 0.163±0.04 0.357±0.04 1.600±0.49 N/A 0.363±0.13 0.042±0.00 N/A
ENSMUST00000143808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.798±0.00 0.140±0.00 N/A
ENSMUSG00000079563 ENSMUST00000114455 0.307±0.11 N/A 0.102±0.06 0.020±0.00 7.754±4.15 0.509±0.29 0.063±0.01 0.547±0.28 1.922±1.06 0.813±0.28 0.276±0.24 0.315±0.13 0.053±0.02 0.477±0.24
ENSMUST00000170392 0.048±0.00 0.311±0.06 0.032±0.00 N/A 4.857±1.93 0.627±0.26 N/A 0.291±0.15 45.599±39.13 0.283±0.12 N/A 0.222±0.18 0.011±0.00 0.287±0.00

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