C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS protein activator like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135618 Rasal3-005 ENSMUSG00000052142 10090 - 17:32390924-32403581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000135618
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000135618 0.676±0.40 0.573±0.27 0.293±0.02 0.380±0.24 15.125±5.41 1.530±0.48 0.156±0.06 0.587±0.36 0.637±0.32 1.842±0.33 0.581±0.77 0.474±0.20 0.151±0.05 0.085±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IV CIL_0000IV_0002 CGP 17:32354055-32403583
CIL_00019W CIL_00019W_0002 CGP 17:32390659-32424167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005099 IBA Ras GTPase activator activity
GO:0005737 IBA cytoplasm
GO:0007165 IEA signal transduction
GO:0031235 IBA intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032320 IBA positive regulation of Ras GTPase activity
GO:0046580 IBA negative regulation of Ras protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343625 RASAL3-001 protein_coding Homo_sapiens 0 2359
ENST00000595098 RASAL3-005 processed_transcript Homo_sapiens 0 237
ENST00000599694 RASAL3-003 protein_coding Homo_sapiens 0 1055
ENST00000602101 RASAL3-002 retained_intron Homo_sapiens 0 1683

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