C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052293 Taf9 10090 + 13:100651579-100656060 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000167256 Taf9-201 100651607-100656059 protein_coding
  ENSMUST00000185767 Taf9-003 100651584-100655515 protein_coding
  ENSMUST00000187792 Taf9-004 100651625-100655560 protein_coding
  ENSMUST00000190165 Taf9-002 100651579-100655595 protein_coding
  ENSMUST00000190594 Taf9-001 100651626-100656060 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000167256ENSMUST00000185767ENSMUST00000190165
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000167256 N/A 2.950±0.00 N/A 152.240±28.92
ENSMUST00000185767 19.739±0.00 19.950±0.00 34.111±0.00 124.649±30.05
ENSMUST00000190165 N/A N/A N/A 124.092±45.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005634 IDA nucleus
GO:0005669 ISO transcription factor TFIID complex
GO:0006352 IEA DNA-templated transcription, initiation
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077870 taf9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_coding Danio_rerio
ENSG00000273841 AK6 adenylate kinase 6 protein_coding Homo_sapiens

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