C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077870 taf9 7955 - 21:37684305-37690900 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111885 taf9-001 37684305-37690900 protein_coding
  ENSDART00000150984 taf9-004 37684309-37690816 protein_coding
  ENSDART00000151131 taf9-002 37689126-37690856 retained_intron
  ENSDART00000151333 taf9-003 37688416-37690822 retained_intron
  ENSDART00000151534 taf9-006 37686461-37690805 processed_transcript
  ENSDART00000151767 taf9-005 37687358-37690277 processed_transcript

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000111885ENSDART00000150984ENSDART00000151131ENSDART00000151534
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000111885 15.845±3.74 13.493±0.02 21.817±0.00 0.882±0.00 4.460±0.00
ENSDART00000150984 4.193±0.00 8.527±4.69 N/A 0.572±0.00 3.461±0.00
ENSDART00000151131 6.192±0.00 2.846±1.31 N/A N/A N/A
ENSDART00000151534 N/A N/A 16.490±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006352 IEA DNA-dependent transcription, initiation
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000187325 TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa protein_coding Homo_sapiens
ENSG00000273841 AK6 adenylate kinase 6 protein_coding Homo_sapiens
ENSMUSG00000047242 Taf9b TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_coding Mus_musculus
ENSMUSG00000052293 Taf9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_coding Mus_musculus
ENSMUSG00000078941 Ak6 adenylate kinase 6 protein_coding Mus_musculus

Loading