C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RFT1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052395 Rft1 10090 + 14:30654360-30691317 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064230 Rft1-001 30654360-30691317 protein_coding
  ENSMUST00000131097 Rft1-003 30654407-30691317 nonsense_mediated_decay
  ENSMUST00000133573 Rft1-004 30654375-30661363 processed_transcript
  ENSMUST00000141379 Rft1-006 30682352-30689954 processed_transcript
  ENSMUST00000143534 Rft1-002 30654387-30664597 retained_intron
  ENSMUST00000143923 Rft1-005 30654383-30663424 processed_transcript
  ENSMUST00000155689 Rft1-007 30654407-30691317 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064230ENSMUST00000131097ENSMUST00000143534ENSMUST00000155689
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064230 10.078±2.61 10.200±2.86 7.162±1.62 1.936±0.69 5.532±1.33 4.827±2.86 3.131±0.77 6.060±1.97 4.929±2.57 5.828±1.53 1.529±0.40 6.529±2.40 4.380±1.58 2.286±1.36
ENSMUST00000131097 4.683±1.76 7.373±1.60 N/A 1.081±0.10 5.660±2.53 3.766±1.22 1.280±0.00 3.726±1.40 1.298±0.97 2.895±0.54 0.790±0.32 10.526±4.83 1.301±0.66 1.789±0.01
ENSMUST00000143534 N/A N/A N/A 0.623±0.19 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155689 N/A N/A N/A 1.940±0.00 N/A N/A N/A N/A N/A N/A N/A 2.249±0.00 2.076±0.00 0.990±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005319 IEA lipid transporter activity
GO:0005575 ND cellular_component
GO:0006869 IEA lipid transport
GO:0008643 IEA carbohydrate transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060398 rft1 RFT1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000163933 RFT1 RFT1 homolog (S. cerevisiae) protein_coding Homo_sapiens

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