C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RFT1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131097 Rft1-003 ENSMUSG00000052395 10090 + 14:30654407-30691317 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000131097
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000131097 4.683±1.76 7.373±1.60 1.081±0.10 5.660±2.53 3.766±1.22 1.280±0.00 3.726±1.40 1.298±0.97 2.895±0.54 0.790±0.32 10.526±4.83 1.301±0.66 1.789±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005319 IEA lipid transporter activity
GO:0005575 ND cellular_component
GO:0006869 IEA lipid transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296292 RFT1-001 protein_coding Homo_sapiens 0 1670
ENST00000394738 RFT1-002 protein_coding Homo_sapiens 0 1330
ENST00000467048 RFT1-005 protein_coding Homo_sapiens 0 628
ENST00000471158 RFT1-004 retained_intron Homo_sapiens 0 547

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