C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RFT1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163933 RFT1 9606 - 3:53088483-53130462 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296292 RFT1-001 53088483-53130462 protein_coding
  ENST00000394738 RFT1-002 53091665-53130453 protein_coding
  ENST00000467048 RFT1-005 53104042-53130411 protein_coding
  ENST00000471158 RFT1-004 53103573-53120021 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000296292ENST00000394738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000296292 0.969±0.00 0.873±0.00 0.597±0.00 1.604±0.48 1.116±0.27 0.829±0.00 0.560±0.10 1.649±0.00 1.033±0.03 0.712±0.16 N/A 1.508±0.73 0.992±0.16
ENST00000394738 3.227±0.00 4.649±0.00 1.804±0.00 1.856±0.00 3.463±0.58 2.247±0.00 1.707±0.00 3.724±0.58 4.079±0.15 1.783±0.00 1.851±0.00 4.304±0.97 8.276±1.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005319 IEA lipid transporter activity
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0006869 IEA lipid transport
GO:0008643 IEA carbohydrate transport
GO:0016021 IEA integral component of membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060398 rft1 RFT1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000052395 Rft1 RFT1 homolog (S. cerevisiae) protein_coding Mus_musculus

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