C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal V1 subunit A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052459 Atp6v1a 10090 - 16:44085402-44139705 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063661 Atp6v1a-002 44085645-44139196 protein_coding
  ENSMUST00000114666 Atp6v1a-001 44085402-44139305 protein_coding
  ENSMUST00000124102 Atp6v1a-004 44109623-44139018 protein_coding
  ENSMUST00000130036 Atp6v1a-003 44097175-44138980 retained_intron
  ENSMUST00000137557 Atp6v1a-005 44109500-44139630 protein_coding
  ENSMUST00000147025 Atp6v1a-006 44111693-44139705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063661ENSMUST00000114666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063661 10.791±0.72 15.293±2.43 5.755±1.19 14.180±9.38 8.001±2.72 5.636±1.88 1.147±0.38 29.188±6.40 3.810±1.01 10.647±0.94 0.699±0.15 10.126±4.03 6.311±2.91 3.692±1.72
ENSMUST00000114666 10.927±0.92 4.241±2.27 11.376±0.08 19.604±1.95 7.433±1.88 6.122±1.38 3.509±0.64 47.782±7.30 7.312±2.21 13.728±1.34 2.112±0.61 4.991±2.42 12.536±7.16 5.486±2.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000555 CIL_000555_0002 CGP 16:43980350-44139705
CIL_0003CI CIL_0003CI_0002 CGP 16:44085402-44163366

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005765 IEA lysosomal membrane
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 IEA proton transport
GO:0016324 IDA apical plasma membrane
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0046034 IEA ATP metabolic process
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034534 atp6v1aa ATPase, H+ transporting, lysosomal V1 subunit Aa protein_coding Danio_rerio
ENSDARG00000076318 atp6v1ab ATPase, H+ transporting, lysosomal V1 subunit Ab protein_coding Danio_rerio
ENSG00000114573 ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A protein_coding Homo_sapiens

Loading