C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V1 subunit A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114666 Atp6v1a-001 ENSMUSG00000052459 10090 - 16:44085402-44139305 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114666 10.927±0.92 4.241±2.27 11.376±0.08 19.604±1.95 7.433±1.88 6.122±1.38 3.509±0.64 47.782±7.30 7.312±2.21 13.728±1.34 2.112±0.61 4.991±2.42 12.536±7.16 5.486±2.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000555 CIL_000555_0002 CGP 16:43980350-44139705
CIL_0003CI CIL_0003CI_0002 CGP 16:44085402-44163366

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005765 IEA lysosomal membrane
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 IEA proton transport
GO:0016324 IDA apical plasma membrane
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0046034 IEA ATP metabolic process
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273398 ATP6V1A-001 protein_coding Homo_sapiens 0 2615
ENST00000461496 ATP6V1A-007 processed_transcript Homo_sapiens 0 481
ENST00000470455 ATP6V1A-002 nonsense_mediated_decay Homo_sapiens 0 2427
ENST00000475322 ATP6V1A-005 protein_coding Homo_sapiens 0 857
ENST00000496747 ATP6V1A-006 protein_coding Homo_sapiens 0 817

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