C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+ transporting, lysosomal V1 subunit A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063661 Atp6v1a-002 ENSMUSG00000052459 10090 - 16:44085645-44139196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063661
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063661 10.791±0.72 15.293±2.43 5.755±1.19 14.180±9.38 8.001±2.72 5.636±1.88 1.147±0.38 29.188±6.40 3.810±1.01 10.647±0.94 0.699±0.15 10.126±4.03 6.311±2.91 3.692±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000555 CIL_000555_0002 CGP 16:43980350-44139705
CIL_0003CI CIL_0003CI_0002 CGP 16:44085402-44163366

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0015992 IEA proton transport
GO:0016324 IDA apical plasma membrane
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0046034 IEA ATP metabolic process
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273398 ATP6V1A-001 protein_coding Homo_sapiens 0 2569
ENST00000461496 ATP6V1A-007 processed_transcript Homo_sapiens 0 481
ENST00000470455 ATP6V1A-002 nonsense_mediated_decay Homo_sapiens 0 2427
ENST00000475322 ATP6V1A-005 protein_coding Homo_sapiens 0 896
ENST00000496747 ATP6V1A-006 protein_coding Homo_sapiens 0 817

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