C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: giant axonal neuropathy
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052557 Gan 10090 + 8:117158135-117205834 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064488 Gan-201 117158135-117205186 protein_coding
  ENSMUST00000162997 Gan-001 117158137-117205834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064488ENSMUST00000162997
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064488 0.734±0.38 1.513±0.15 N/A 1.494±0.78 1.343±0.36 0.370±0.07 0.733±0.26 0.299±0.13 1.821±0.17 0.217±0.08 1.460±0.51 0.755±0.39 0.509±0.13
ENSMUST00000162997 1.050±0.00 N/A 2.086±0.00 1.172±0.15 1.068±0.24 0.259±0.09 0.536±0.10 0.426±0.16 1.386±0.34 0.281±0.09 1.517±0.88 1.126±0.46 0.468±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019F CIL_00019F_0002 CGP 8:117095854-117205834
CIL_0001ZR CIL_0001ZR_0002 CGP 8:117158135-117461503

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007010 ISO cytoskeleton organization
GO:0008219 IEA cell death
GO:0016567 ISS protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087650 CABZ01034126.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000261609 GAN gigaxonin protein_coding Homo_sapiens

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