C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: giant axonal neuropathy
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064488 Gan-201 ENSMUSG00000052557 10090 + 8:117158135-117205186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064488
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064488 0.734±0.38 1.513±0.15 1.494±0.78 1.343±0.36 0.370±0.07 0.733±0.26 0.299±0.13 1.821±0.17 0.217±0.08 1.460±0.51 0.755±0.39 0.509±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019F CIL_00019F_0002 CGP 8:117095854-117205834
CIL_0001ZR CIL_0001ZR_0002 CGP 8:117158135-117461503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007010 ISO cytoskeleton organization
GO:0008219 IEA cell death
GO:0016567 ISS protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000568107 GAN-001 protein_coding Homo_sapiens 0 2145

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