C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, matrin type 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052676 Zmat1 10090 - X:134971372-135009209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064659 Zmat1-201 134971375-135009209 protein_coding
  ENSMUST00000113185 Zmat1-001 134971372-135009185 protein_coding
  ENSMUST00000141849 Zmat1-003 134972777-134978628 retained_intron
  ENSMUST00000151252 Zmat1-002 134972943-134981434 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064659ENSMUST00000113185ENSMUST00000141849
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064659 0.669±0.32 1.368±0.39 0.392±0.22 2.019±1.30 0.423±0.22 N/A 0.436±0.09 0.546±0.19 0.318±0.13 0.703±0.10 0.202±0.05 1.551±1.65 1.229±0.42 0.652±0.23
ENSMUST00000113185 N/A 1.282±0.37 N/A 2.082±0.00 0.100±0.00 0.123±0.04 0.226±0.09 0.314±0.00 0.295±0.10 0.201±0.00 0.157±0.05 2.095±1.87 1.984±0.11 0.626±0.00
ENSMUST00000141849 N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 0.086±0.00 N/A 0.062±0.01 N/A N/A 1.437±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037S CIL_00037S_0002 CGP X:134944526-135009209

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058679 ZMAT1 zinc finger, matrin-type 1 protein_coding Danio_rerio
ENSG00000166432 ZMAT1 zinc finger, matrin-type 1 protein_coding Homo_sapiens

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