C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, matrin-type 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166432 ZMAT1 9606 - X:101882288-101932031 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372782 ZMAT1-001 101882290-101931764 protein_coding
  ENST00000458570 ZMAT1-005 101883060-101932031 processed_transcript
  ENST00000488347 ZMAT1-002 101883640-101932027 processed_transcript
  ENST00000490757 ZMAT1-004 101884696-101887726 processed_transcript
  ENST00000494068 ZMAT1-003 101882658-101890221 processed_transcript
  ENST00000540921 ZMAT1-201 101882288-101918633 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372782ENST00000458570ENST00000488347ENST00000494068ENST00000540921
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A
ENST00000458570 N/A N/A N/A N/A 0.704±0.00 0.207±0.00 0.341±0.00 0.234±0.00 N/A 0.567±0.00 N/A 0.316±0.00 0.162±0.14 5.639±0.00
ENST00000488347 N/A N/A N/A 0.521±0.00 N/A N/A N/A 0.333±0.00 0.699±0.00 0.756±0.46 0.380±0.00 0.207±0.00 N/A N/A
ENST00000494068 0.316±0.00 0.769±0.00 1.110±0.00 0.940±0.00 0.678±0.06 0.560±0.00 0.202±0.03 0.628±0.16 0.227±0.15 0.799±0.71 0.047±0.00 0.674±0.50 0.017±0.00 0.936±0.65
ENST00000540921 0.259±0.00 N/A N/A 1.353±0.00 N/A 1.062±0.00 0.632±0.00 1.367±0.00 0.205±0.00 0.986±0.00 0.263±0.00 0.903±0.82 0.037±0.00 1.038±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037S CIL_00037S_0001 CGP X:101832112-101932031

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0016884 IEA carbon-nitrogen ligase activity, with glutamine as amido-N-donor

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058679 ZMAT1 zinc finger, matrin-type 1 protein_coding Danio_rerio
ENSMUSG00000052676 Zmat1 zinc finger, matrin type 1 protein_coding Mus_musculus

Loading