C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00037S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126952-ENSG00000166432 CGP 9606 X:101832112-101932031
GeneTranscriptPositionBiotype
ENSG00000166432 (ZMAT1)
zinc finger, matrin-type 1
ENST00000372782 (ZMAT1-001) 101882290-101931764 protein_coding
ENST00000458570 (ZMAT1-005) 101883060-101932031 processed_transcript
ENST00000488347 (ZMAT1-002) 101883640-101932027 processed_transcript
ENST00000490757 (ZMAT1-004) 101884696-101887726 processed_transcript
ENST00000494068 (ZMAT1-003) 101882658-101890221 processed_transcript
ENST00000540921 (ZMAT1-201) 101882288-101918633 protein_coding
ENSG00000235196 (RP1-3E10.2)
ENST00000429048 (RP1-3E10.2-001) 101911529-101912072 processed_pseudogene
CIL_00037S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009941-ENSMUSG00000052676 CGP 10090 X:134944526-135009209
GeneTranscriptPositionBiotype
ENSMUSG00000009941 (Nxf2)
nuclear RNA export factor 2
ENSMUST00000010085 (Nxf2-003) 134944528-134964754 protein_coding
ENSMUST00000113187 (Nxf2-002) 134944528-134963896 protein_coding
ENSMUST00000113189 (Nxf2-001) 134944528-134964754 protein_coding
ENSMUST00000143059 (Nxf2-004) 134944526-134956350 retained_intron
ENSMUSG00000052676 (Zmat1)
zinc finger, matrin type 1
ENSMUST00000064659 (Zmat1-201) 134971375-135009209 protein_coding
ENSMUST00000113185 (Zmat1-001) 134971372-135009185 protein_coding
ENSMUST00000141849 (Zmat1-003) 134972777-134978628 retained_intron
ENSMUST00000151252 (Zmat1-002) 134972943-134981434 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037S_0001ENSG00000166432ENST00000372782ENST00000458570ENST00000488347ENST00000490757ENST00000494068ENST00000540921ENSG00000235196ENST00000429048CIL_00037S_0002ENSMUSG00000009941ENSMUST00000010085ENSMUST00000113187ENSMUST00000113189ENSMUST00000143059ENSMUSG00000052676ENSMUST00000064659ENSMUST00000113185ENSMUST00000141849ENSMUST00000151252
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037S_0001ENSG00000166432ENST00000372782ENST00000458570ENST00000488347ENST00000494068ENST00000540921ENSG00000235196ENST00000429048CIL_00037S_0002ENSMUSG00000009941ENSMUST00000010085ENSMUST00000113187ENSMUST00000113189ENSMUST00000143059ENSMUSG00000052676ENSMUST00000064659ENSMUST00000113185ENSMUST00000141849
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166432 ENST00000372782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A
ENST00000458570 N/A N/A N/A N/A 0.704±0.00 0.207±0.00 0.341±0.00 0.234±0.00 N/A 0.567±0.00 N/A 0.316±0.00 0.162±0.14 5.639±0.00
ENST00000488347 N/A N/A N/A 0.521±0.00 N/A N/A N/A 0.333±0.00 0.699±0.00 0.756±0.46 0.380±0.00 0.207±0.00 N/A N/A
ENST00000490757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494068 0.316±0.00 0.769±0.00 1.110±0.00 0.940±0.00 0.678±0.06 0.560±0.00 0.202±0.03 0.628±0.16 0.227±0.15 0.799±0.71 0.047±0.00 0.674±0.50 0.017±0.00 0.936±0.65
ENST00000540921 0.259±0.00 N/A N/A 1.353±0.00 N/A 1.062±0.00 0.632±0.00 1.367±0.00 0.205±0.00 0.986±0.00 0.263±0.00 0.903±0.82 0.037±0.00 1.038±0.21
ENSG00000235196 ENST00000429048 N/A N/A 0.863±0.00 0.174±0.00 N/A N/A N/A 0.988±0.00 N/A N/A N/A 0.741±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009941 ENSMUST00000010085 N/A N/A N/A 0.029±0.00 N/A N/A N/A 0.020±0.00 0.012±0.01 N/A N/A 0.138±0.00 N/A 1.539±0.63
ENSMUST00000113187 0.046±0.03 N/A 0.042±0.00 0.048±0.02 N/A N/A 0.032±0.00 N/A 0.038±0.01 N/A 0.011±0.00 0.374±0.21 0.063±0.01 7.452±0.00
ENSMUST00000113189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 1.218±0.54
ENSMUST00000143059 0.098±0.02 N/A N/A N/A 0.079±0.03 0.053±0.00 0.040±0.00 N/A 0.064±0.05 0.038±0.01 0.026±0.00 0.210±0.11 0.095±0.07 1.890±0.56
ENSMUSG00000052676 ENSMUST00000064659 0.669±0.32 1.368±0.39 0.392±0.22 2.019±1.30 0.423±0.22 N/A 0.436±0.09 0.546±0.19 0.318±0.13 0.703±0.10 0.202±0.05 1.551±1.65 1.229±0.42 0.652±0.23
ENSMUST00000113185 N/A 1.282±0.37 N/A 2.082±0.00 0.100±0.00 0.123±0.04 0.226±0.09 0.314±0.00 0.295±0.10 0.201±0.00 0.157±0.05 2.095±1.87 1.984±0.11 0.626±0.00
ENSMUST00000141849 N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 0.086±0.00 N/A 0.062±0.01 N/A N/A 1.437±0.00
ENSMUST00000151252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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