C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 157
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052949 Rnf157 10090 - 11:116336353-116413032 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100202 Rnf157-001 116336353-116413004 protein_coding
  ENSMUST00000106398 Rnf157-003 116336353-116413004 protein_coding
  ENSMUST00000129202 Rnf157-008 116359252-116360012 processed_transcript
  ENSMUST00000137083 Rnf157-005 116357368-116359307 processed_transcript
  ENSMUST00000137264 Rnf157-011 116338339-116347444 processed_transcript
  ENSMUST00000141229 Rnf157-004 116352652-116359505 processed_transcript
  ENSMUST00000142758 Rnf157-007 116359889-116387405 processed_transcript
  ENSMUST00000148763 Rnf157-009 116353968-116355469 processed_transcript
  ENSMUST00000149147 Rnf157-002 116336353-116359081 protein_coding
  ENSMUST00000149682 Rnf157-006 116402841-116413032 processed_transcript
  ENSMUST00000150775 Rnf157-010 116338406-116347918 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100202ENSMUST00000106398ENSMUST00000141229ENSMUST00000149147
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100202 0.842±0.63 0.644±0.23 1.208±0.10 24.492±13.65 0.580±0.28 1.040±0.17 0.583±0.37 0.329±0.09 0.278±0.11 0.723±0.19 3.188±0.49 0.760±0.27 3.553±1.78 2.422±1.06
ENSMUST00000106398 0.388±0.00 0.772±0.02 N/A N/A 0.637±0.11 N/A N/A 0.368±0.00 0.177±0.06 0.227±0.00 N/A 0.834±0.33 N/A N/A
ENSMUST00000141229 N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.03 N/A N/A N/A N/A N/A
ENSMUST00000149147 0.156±0.00 1.340±0.49 N/A 11.539±0.00 1.301±0.62 0.734±0.32 0.520±0.31 0.358±0.14 0.222±0.07 0.676±0.22 2.207±0.17 1.070±0.28 1.981±0.89 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_0007CH CIL_0007CH_0002 CGP 11:116330704-116413032
CIL_0007BT CIL_0007BT_0002 CGP 11:116336353-116439077

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057481 RNF157 ring finger protein 157 protein_coding Danio_rerio
ENSG00000141576 RNF157 ring finger protein 157 protein_coding Homo_sapiens

Loading