C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007CH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129654-ENSG00000141576 CGP 9606 17:76136333-76240373
GeneTranscriptPositionBiotype
ENSG00000129654 (FOXJ1)
forkhead box J1 		ENST00000322957 (FOXJ1-001) 76136333-76141299 protein_coding
ENSG00000141576 (RNF157)
ring finger protein 157 		ENST00000269391 (RNF157-001) 76142453-76240373 protein_coding
ENST00000319945 (RNF157-010) 76144340-76240308 protein_coding
ENST00000589317 (RNF157-007) 76145015-76152583 retained_intron
ENST00000589912 (RNF157-009) 76142633-76144734 processed_transcript
ENST00000591355 (RNF157-008) 76145279-76156256 protein_coding
ENST00000591615 (RNF157-003) 76162761-76167082 protein_coding
ENST00000592271 (RNF157-004) 76211877-76240301 protein_coding
ENST00000592869 (RNF157-006) 76154302-76158523 retained_intron
ENST00000593155 (RNF157-005) 76161562-76162145 retained_intron
ENSG00000228218 (ATF4P3)
activating transcription factor 4 pseudogene 3 		ENST00000433309 (ATF4P3-001) 76225751-76226806 processed_pseudogene
ENSG00000267376 (ATP5LP6)
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit g, pseudogene 6 		ENST00000585651 (ATP5LP6-001) 76202644-76202796 processed_pseudogene
CIL_0007CH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034227-ENSMUSG00000052949 CGP 10090 11:116330704-116413032
GeneTranscriptPositionBiotype
ENSMUSG00000034227 (Foxj1)
forkhead box J1 		ENSMUST00000036215 (Foxj1-001) 116330704-116335399 protein_coding
ENSMUSG00000052949 (Rnf157)
ring finger protein 157 		ENSMUST00000100202 (Rnf157-001) 116336353-116413004 protein_coding
ENSMUST00000106398 (Rnf157-003) 116336353-116413004 protein_coding
ENSMUST00000129202 (Rnf157-008) 116359252-116360012 processed_transcript
ENSMUST00000137083 (Rnf157-005) 116357368-116359307 processed_transcript
ENSMUST00000137264 (Rnf157-011) 116338339-116347444 processed_transcript
ENSMUST00000141229 (Rnf157-004) 116352652-116359505 processed_transcript
ENSMUST00000142758 (Rnf157-007) 116359889-116387405 processed_transcript
ENSMUST00000148763 (Rnf157-009) 116353968-116355469 processed_transcript
ENSMUST00000149147 (Rnf157-002) 116336353-116359081 protein_coding
ENSMUST00000149682 (Rnf157-006) 116402841-116413032 processed_transcript
ENSMUST00000150775 (Rnf157-010) 116338406-116347918 protein_coding
ENSMUSG00000081929 (Rps11-ps2)
ribosomal protein S11, pseudogene 2 		ENSMUST00000121547 (Rps11-ps2-001) 116382750-116383205 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CH_0001ENSG00000129654ENST00000322957ENSG00000141576ENST00000269391ENST00000319945ENST00000589317ENST00000589912ENST00000591355ENST00000591615ENST00000592271ENST00000592869ENST00000593155ENSG00000228218ENST00000433309ENSG00000267376ENST00000585651CIL_0007CH_0002ENSMUSG00000034227ENSMUST00000036215ENSMUSG00000052949ENSMUST00000100202ENSMUST00000106398ENSMUST00000129202ENSMUST00000137083ENSMUST00000137264ENSMUST00000141229ENSMUST00000142758ENSMUST00000148763ENSMUST00000149147ENSMUST00000149682ENSMUST00000150775ENSMUSG00000081929ENSMUST00000121547
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CH_0001ENSG00000129654ENST00000322957ENSG00000141576ENST00000269391ENST00000319945ENST00000592271ENST00000592869ENSG00000228218ENST00000433309ENSG00000267376ENST00000585651CIL_0007CH_0002ENSMUSG00000034227ENSMUST00000036215ENSMUSG00000052949ENSMUST00000100202ENSMUST00000106398ENSMUST00000141229ENSMUST00000149147ENSMUSG00000081929ENSMUST00000121547
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129654 ENST00000322957 N/A N/A N/A N/A N/A N/A N/A 2.690±0.00 N/A 21.577±19.98 N/A 21.652±11.18 N/A 22.569±2.71
ENSG00000141576 ENST00000269391 5.560±0.00 N/A N/A 19.114±10.05 3.204±0.00 N/A 1.023±0.93 1.503±0.00 0.644±0.45 N/A 11.081±8.76 4.491±3.48 0.909±0.35 12.492±4.50
ENST00000319945 N/A N/A 0.783±0.00 4.930±0.00 0.149±0.00 N/A 0.165±0.00 0.208±0.00 0.787±0.00 0.384±0.00 2.729±0.00 4.167±0.00 N/A N/A
ENST00000589317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592271 N/A N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A N/A
ENST00000592869 N/A N/A N/A N/A N/A N/A 1.279±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000593155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228218 ENST00000433309 0.199±0.00 0.293±0.00 N/A 0.054±0.00 0.145±0.06 0.108±0.08 0.015±0.00 0.050±0.00 0.080±0.07 0.031±0.00 0.141±0.00 0.148±0.08 0.091±0.00 0.043±0.02
ENSG00000267376 ENST00000585651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.410±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034227 ENSMUST00000036215 0.376±0.36 0.073±0.01 0.048±0.02 6.888±4.41 1.050±0.53 0.373±0.09 0.816±0.84 0.339±0.05 0.302±0.31 26.538±9.90 0.039±0.03 25.741±13.29 1.115±1.07 29.133±13.64
ENSMUSG00000052949 ENSMUST00000100202 0.842±0.63 0.644±0.23 1.208±0.10 24.492±13.65 0.580±0.28 1.040±0.17 0.583±0.37 0.329±0.09 0.278±0.11 0.723±0.19 3.188±0.49 0.760±0.27 3.553±1.78 2.422±1.06
ENSMUST00000106398 0.388±0.00 0.772±0.02 N/A N/A 0.637±0.11 N/A N/A 0.368±0.00 0.177±0.06 0.227±0.00 N/A 0.834±0.33 N/A N/A
ENSMUST00000129202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141229 N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.03 N/A N/A N/A N/A N/A
ENSMUST00000142758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149147 0.156±0.00 1.340±0.49 N/A 11.539±0.00 1.301±0.62 0.734±0.32 0.520±0.31 0.358±0.14 0.222±0.07 0.676±0.22 2.207±0.17 1.070±0.28 1.981±0.89 N/A
ENSMUST00000149682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081929 ENSMUST00000121547 N/A N/A 0.199±0.00 0.544±0.14 0.616±0.55 N/A N/A 0.110±0.00 0.106±0.01 0.143±0.00 0.761±0.59 0.212±0.00 0.290±0.00 0.241±0.00

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