C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007CH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129654-ENSG00000141576 CGP 9606 17:76136333-76240373
GeneTranscriptPositionBiotype
ENSG00000129654 (FOXJ1)
forkhead box J1 		ENST00000322957 (FOXJ1-001) 76136333-76141299 protein_coding
ENSG00000141576 (RNF157)
ring finger protein 157 		ENST00000269391 (RNF157-001) 76142453-76240373 protein_coding
ENST00000319945 (RNF157-010) 76144340-76240308 protein_coding
ENST00000589317 (RNF157-007) 76145015-76152583 retained_intron
ENST00000589912 (RNF157-009) 76142633-76144734 processed_transcript
ENST00000591355 (RNF157-008) 76145279-76156256 protein_coding
ENST00000591615 (RNF157-003) 76162761-76167082 protein_coding
ENST00000592271 (RNF157-004) 76211877-76240301 protein_coding
ENST00000592869 (RNF157-006) 76154302-76158523 retained_intron
ENST00000593155 (RNF157-005) 76161562-76162145 retained_intron
ENSG00000228218 (ATF4P3)
activating transcription factor 4 pseudogene 3 		ENST00000433309 (ATF4P3-001) 76225751-76226806 processed_pseudogene
ENSG00000267376 (ATP5LP6)
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit g, pseudogene 6 		ENST00000585651 (ATP5LP6-001) 76202644-76202796 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007CH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034227-ENSMUSG00000052949 CGP 10090 11:116330704-116413032
GeneTranscriptPositionBiotype
ENSMUSG00000034227 (Foxj1)
forkhead box J1 		ENSMUST00000036215 (Foxj1-001) 116330704-116335399 protein_coding
ENSMUSG00000052949 (Rnf157)
ring finger protein 157 		ENSMUST00000100202 (Rnf157-001) 116336353-116413004 protein_coding
ENSMUST00000106398 (Rnf157-003) 116336353-116413004 protein_coding
ENSMUST00000129202 (Rnf157-008) 116359252-116360012 processed_transcript
ENSMUST00000137083 (Rnf157-005) 116357368-116359307 processed_transcript
ENSMUST00000137264 (Rnf157-011) 116338339-116347444 processed_transcript
ENSMUST00000141229 (Rnf157-004) 116352652-116359505 processed_transcript
ENSMUST00000142758 (Rnf157-007) 116359889-116387405 processed_transcript
ENSMUST00000148763 (Rnf157-009) 116353968-116355469 processed_transcript
ENSMUST00000149147 (Rnf157-002) 116336353-116359081 protein_coding
ENSMUST00000149682 (Rnf157-006) 116402841-116413032 processed_transcript
ENSMUST00000150775 (Rnf157-010) 116338406-116347918 protein_coding
ENSMUSG00000081929 (Rps11-ps2)
ribosomal protein S11, pseudogene 2 		ENSMUST00000121547 (Rps11-ps2-001) 116382750-116383205 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CH_0001ENSG00000129654ENST00000322957ENSG00000141576ENST00000269391ENST00000319945ENST00000589317ENST00000589912ENST00000591355ENST00000591615ENST00000592271ENST00000592869ENST00000593155ENSG00000228218ENST00000433309ENSG00000267376ENST00000585651CIL_0007CH_0002ENSMUSG00000034227ENSMUST00000036215ENSMUSG00000052949ENSMUST00000100202ENSMUST00000106398ENSMUST00000129202ENSMUST00000137083ENSMUST00000137264ENSMUST00000141229ENSMUST00000142758ENSMUST00000148763ENSMUST00000149147ENSMUST00000149682ENSMUST00000150775ENSMUSG00000081929ENSMUST00000121547
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007CH_0001ENSG00000129654ENST00000322957ENSG00000141576ENST00000269391ENST00000319945ENST00000592271ENST00000592869ENSG00000228218ENST00000433309ENSG00000267376ENST00000585651CIL_0007CH_0002ENSMUSG00000034227ENSMUST00000036215ENSMUSG00000052949ENSMUST00000100202ENSMUST00000106398ENSMUST00000141229ENSMUST00000149147ENSMUSG00000081929ENSMUST00000121547
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129654 ENST00000322957 N/A N/A N/A N/A N/A N/A N/A 2.690±0.00 N/A 21.577±19.98 N/A 21.652±11.18 N/A 22.569±2.71
ENSG00000141576 ENST00000269391 5.560±0.00 N/A N/A 19.114±10.05 3.204±0.00 N/A 1.023±0.93 1.503±0.00 0.644±0.45 N/A 11.081±8.76 4.491±3.48 0.909±0.35 12.492±4.50
ENST00000319945 N/A N/A 0.783±0.00 4.930±0.00 0.149±0.00 N/A 0.165±0.00 0.208±0.00 0.787±0.00 0.384±0.00 2.729±0.00 4.167±0.00 N/A N/A
ENST00000589317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592271 N/A N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A N/A
ENST00000592869 N/A N/A N/A N/A N/A N/A 1.279±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000593155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228218 ENST00000433309 0.199±0.00 0.293±0.00 N/A 0.054±0.00 0.145±0.06 0.108±0.08 0.015±0.00 0.050±0.00 0.080±0.07 0.031±0.00 0.141±0.00 0.148±0.08 0.091±0.00 0.043±0.02
ENSG00000267376 ENST00000585651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.410±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034227 ENSMUST00000036215 0.376±0.36 0.073±0.01 0.048±0.02 6.888±4.41 1.050±0.53 0.373±0.09 0.816±0.84 0.339±0.05 0.302±0.31 26.538±9.90 0.039±0.03 25.741±13.29 1.115±1.07 29.133±13.64
ENSMUSG00000052949 ENSMUST00000100202 0.842±0.63 0.644±0.23 1.208±0.10 24.492±13.65 0.580±0.28 1.040±0.17 0.583±0.37 0.329±0.09 0.278±0.11 0.723±0.19 3.188±0.49 0.760±0.27 3.553±1.78 2.422±1.06
ENSMUST00000106398 0.388±0.00 0.772±0.02 N/A N/A 0.637±0.11 N/A N/A 0.368±0.00 0.177±0.06 0.227±0.00 N/A 0.834±0.33 N/A N/A
ENSMUST00000129202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141229 N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.03 N/A N/A N/A N/A N/A
ENSMUST00000142758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149147 0.156±0.00 1.340±0.49 N/A 11.539±0.00 1.301±0.62 0.734±0.32 0.520±0.31 0.358±0.14 0.222±0.07 0.676±0.22 2.207±0.17 1.070±0.28 1.981±0.89 N/A
ENSMUST00000149682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081929 ENSMUST00000121547 N/A N/A 0.199±0.00 0.544±0.14 0.616±0.55 N/A N/A 0.110±0.00 0.106±0.01 0.143±0.00 0.761±0.59 0.212±0.00 0.290±0.00 0.241±0.00

Loading