C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA E330013P04 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053117 E330013P04Rik 10090 + 19:60144675-60162591 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065383 E330013P04Rik-001 60144675-60162591 lincRNA
  ENSMUST00000190409 E330013P04Rik-003 60144704-60153089 lincRNA
  ENSMUST00000190698 E330013P04Rik-002 60151294-60157305 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065383ENSMUST00000190409ENSMUST00000190698
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065383 3.585±2.45 0.163±0.00 0.539±0.37 0.252±0.13 0.065±0.03 0.045±0.00 0.102±0.06 0.024±0.02 0.044±0.03 0.066±0.03 3.062±1.31 0.013±0.00 0.256±0.13
ENSMUST00000190409 N/A N/A 0.262±0.00 N/A 0.191±0.00 0.073±0.00 N/A 0.105±0.00 0.096±0.00 0.110±0.02 N/A 0.080±0.01 0.567±0.00
ENSMUST00000190698 0.011±0.00 N/A 0.040±0.00 0.059±0.02 N/A N/A 0.025±0.00 0.016±0.00 N/A 0.021±0.01 0.518±0.09 0.020±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KI CIL_0007KI_0003 UCNEbase 19:59043463-60359839
CIL_0008KY CIL_0008KY_0002 VISTA 19:59565705-60167187
CIL_0008MJ CIL_0008MJ_0002 VISTA 19:59715442-60316837
CIL_0004H4 CIL_0004H4_0003 CGP 19:59902884-60226697
CIL_0008IJ CIL_0008IJ_0002 VISTA 19:59903058-60504722

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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