C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cleavage stimulation factor, 3' pre-RNA subunit 2, tau
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053536 Cstf2t 10090 + 19:31082841-31086590 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066039 Cstf2t-201 31082841-31086590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066039
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066039 9.084±3.06 7.289±2.04 10.385±0.41 15.574±3.00 8.519±1.27 10.509±0.94 7.071±0.44 9.457±0.55 6.838±0.83 9.177±0.26 4.583±0.35 12.706±1.85 7.963±1.07 7.273±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ID CIL_0000ID_0002 CGP 19:30567551-31765033

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IDA RNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006378 TAS mRNA polyadenylation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044009 cstf2 cleavage stimulation factor, 3' pre-RNA, subunit 2 protein_coding Danio_rerio
ENSDARG00000090788 cstf2 cleavage stimulation factor, 3' pre-RNA, subunit 2 protein_coding Danio_rerio
ENSG00000177613 CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant protein_coding Homo_sapiens

Loading