C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage stimulation factor, 3' pre-RNA subunit 2, tau
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066039 Cstf2t-201 ENSMUSG00000053536 10090 + 19:31082841-31086590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066039
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066039 9.084±3.06 7.289±2.04 10.385±0.41 15.574±3.00 8.519±1.27 10.509±0.94 7.071±0.44 9.457±0.55 6.838±0.83 9.177±0.26 4.583±0.35 12.706±1.85 7.963±1.07 7.273±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ID CIL_0000ID_0002 CGP 19:30567551-31765033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IDA RNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006378 TAS mRNA polyadenylation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000056627 cstf2-201 protein_coding Danio_rerio 0 394
ENSDART00000124532 cstf2-203 protein_coding Danio_rerio 0 394
ENST00000331173 CSTF2T-001 protein_coding Homo_sapiens 0 1668

Loading