C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ID_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185532-ENSG00000185532 CGP 9606 10:50991358-52298350
GeneTranscriptPositionBiotype
ENSG00000177613 (CSTF2T)
cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant 		ENST00000331173 (CSTF2T-001) 51695487-51699591 protein_coding
ENSG00000185532 (PRKG1)
protein kinase, cGMP-dependent, type I 		ENST00000373975 (PRKG1-005) 52046777-52294176 protein_coding
ENST00000373976 (PRKG1-004) 51153279-52062862 protein_coding
ENST00000373980 (PRKG1-002) 51074174-52298350 protein_coding
ENST00000373985 (PRKG1-001) 50991358-52298350 protein_coding
ENST00000401604 (PRKG1-201) 51804580-52298348 protein_coding
ENSG00000213659 (RSU1P3)
Ras suppressor protein 1 pseudogene 3 		ENST00000412878 (RSU1P3-001) 51319826-51320660 processed_pseudogene
ENSG00000216022 (AC068062.1)
 ENST00000401203 (AC068062.1-201) 51639743-51639832 miRNA
ENSG00000223502 (RP11-96B5.3)
 ENST00000343087 (RP11-96B5.3-001) 51062579-51068553 antisense
ENSG00000231132 (RP11-40C11.2)
 ENST00000435271 (RP11-40C11.2-001) 51244894-51245806 antisense
ENSG00000235279 (RP11-539E19.2)
 ENST00000419889 (RP11-539E19.2-001) 51302566-51306709 sense_intronic
ENSG00000278260 (AL157399.1)
 ENST00000621541 (AL157399.1-201) 51526341-51526433 miRNA
CIL_0000ID_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052920-ENSMUSG00000052920 CGP 10090 19:30567551-31765033
GeneTranscriptPositionBiotype
ENSMUSG00000052920 (Prkg1)
protein kinase, cGMP-dependent, type I 		ENSMUST00000065067 (Prkg1-001) 30567551-31765033 protein_coding
ENSMUST00000073581 (Prkg1-002) 30568547-31664370 protein_coding
ENSMUST00000182401 (Prkg1-004) 30708885-30781452 retained_intron
ENSMUST00000182459 (Prkg1-005) 30568963-30574155 processed_transcript
ENSMUST00000182527 (Prkg1-007) 30619371-30625491 processed_transcript
ENSMUST00000182685 (Prkg1-003) 31742114-31764973 protein_coding
ENSMUST00000183135 (Prkg1-006) 30568961-30574155 processed_transcript
ENSMUSG00000053536 (Cstf2t)
cleavage stimulation factor, 3' pre-RNA subunit 2, tau 		ENSMUST00000066039 (Cstf2t-201) 31082841-31086590 protein_coding
ENSMUSG00000084432 (Gm23426)
predicted gene, 23426 		ENSMUST00000122483 (Gm23426-201) 30704081-30704398 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ID_0001ENSG00000177613ENST00000331173ENSG00000185532ENST00000373975ENST00000373976ENST00000373980ENST00000373985ENST00000401604ENSG00000213659ENST00000412878ENSG00000216022ENST00000401203ENSG00000223502ENST00000343087ENSG00000231132ENST00000435271ENSG00000235279ENST00000419889ENSG00000278260ENST00000621541CIL_0000ID_0002ENSMUSG00000052920ENSMUST00000065067ENSMUST00000073581ENSMUST00000182401ENSMUST00000182459ENSMUST00000182527ENSMUST00000182685ENSMUST00000183135ENSMUSG00000053536ENSMUST00000066039ENSMUSG00000084432ENSMUST00000122483
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ID_0001ENSG00000177613ENST00000331173ENSG00000185532ENST00000373975ENST00000373980ENST00000373985ENST00000401604ENSG00000213659ENST00000412878ENSG00000216022ENST00000401203ENSG00000223502ENST00000343087ENSG00000231132ENST00000435271ENSG00000235279ENST00000419889ENSG00000278260ENST00000621541CIL_0000ID_0002ENSMUSG00000052920ENSMUST00000065067ENSMUST00000073581ENSMUST00000182459ENSMUST00000182527ENSMUST00000182685ENSMUST00000183135ENSMUSG00000053536ENSMUST00000066039ENSMUSG00000084432ENSMUST00000122483
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177613 ENST00000331173 4.957±0.00 6.443±0.00 2.341±0.00 4.945±0.53 4.416±1.41 3.302±0.40 4.143±1.97 4.366±2.02 4.012±1.22 3.511±0.00 2.946±1.55 6.283±3.62 6.391±2.17 7.811±0.91
ENSG00000185532 ENST00000373975 N/A N/A 0.629±0.00 N/A N/A N/A N/A 0.098±0.00 N/A N/A 2.238±0.00 N/A N/A 1.163±0.00
ENST00000373976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373980 0.432±0.00 1.577±0.00 0.244±0.00 1.450±0.41 0.442±0.00 1.168±0.23 1.291±0.46 0.349±0.00 5.285±0.00 0.830±0.00 1.583±0.00 0.477±0.13 0.605±0.40 1.517±0.75
ENST00000373985 1.417±0.00 1.239±0.00 0.373±0.00 N/A 1.140±0.00 1.511±0.31 3.291±0.00 0.725±0.61 0.550±0.50 3.259±0.61 1.289±0.00 0.503±0.03 1.241±0.24 1.024±0.00
ENST00000401604 N/A N/A N/A N/A 1.151±0.64 2.492±0.00 1.234±0.00 N/A 0.080±0.00 0.862±0.00 N/A 0.984±0.31 0.297±0.04 2.138±0.00
ENSG00000213659 ENST00000412878 N/A N/A 0.956±0.00 0.286±0.00 4.007±0.00 5.613±0.00 0.748±0.65 N/A N/A 5.637±0.00 0.498±0.00 0.753±0.71 0.043±0.00 N/A
ENSG00000216022 ENST00000401203 N/A 0.780±0.00 N/A N/A N/A N/A N/A N/A N/A 2.809±0.00 N/A N/A N/A 1.438±0.00
ENSG00000223502 ENST00000343087 0.440±0.00 0.815±0.00 N/A 0.611±0.00 0.534±0.37 0.265±0.00 0.493±0.18 0.626±0.00 0.394±0.00 0.111±0.00 0.037±0.00 0.348±0.00 N/A 0.230±0.14
ENSG00000231132 ENST00000435271 N/A 0.085±0.00 N/A 0.102±0.00 N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.088±0.00 N/A N/A
ENSG00000235279 ENST00000419889 N/A 0.027±0.00 0.423±0.00 1.541±0.00 N/A 5.231±0.00 0.102±0.00 0.080±0.00 N/A N/A N/A 0.691±0.00 N/A N/A
ENSG00000278260 ENST00000621541 N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052920 ENSMUST00000065067 0.298±0.17 0.285±0.00 N/A N/A 0.290±0.15 N/A 0.104±0.00 0.322±0.19 0.076±0.03 0.539±0.00 0.554±0.00 0.584±0.10 0.251±0.10 0.840±0.30
ENSMUST00000073581 1.189±0.89 N/A N/A 1.444±0.00 0.666±0.17 0.814±0.25 0.744±0.13 0.444±0.11 0.066±0.06 1.970±0.16 N/A 1.202±0.78 0.299±0.21 N/A
ENSMUST00000182401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182459 N/A N/A N/A N/A 2.011±0.00 N/A 1.455±0.00 0.826±0.08 N/A N/A N/A N/A N/A 17.515±3.48
ENSMUST00000182527 N/A N/A N/A N/A 0.499±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182685 N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A
ENSMUST00000183135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.245±6.49
ENSMUSG00000053536 ENSMUST00000066039 9.084±3.06 7.289±2.04 10.385±0.41 15.574±3.00 8.519±1.27 10.509±0.94 7.071±0.44 9.457±0.55 6.838±0.83 9.177±0.26 4.583±0.35 12.706±1.85 7.963±1.07 7.273±0.63
ENSMUSG00000084432 ENSMUST00000122483 N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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