C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028721 Tgm5-001 ENSMUSG00000053675 10090 - 2:121046111-121085841 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028721
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028721 0.130±0.08 1.031±0.27 0.022±0.00 0.314±0.19 0.066±0.03 0.013±0.00 0.034±0.03 0.008±0.00 0.308±0.27 0.046±0.03 0.062±0.03 0.241±0.20 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YD CIL_0005YD_0002 CGP 2:121046111-121109795

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0018149 IEA peptide cross-linking
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220420 TGM5-001 protein_coding Homo_sapiens 0 2093
ENST00000349114 TGM5-002 protein_coding Homo_sapiens 0 1751
ENST00000396996 TGM5-003 retained_intron Homo_sapiens 0 1086
ENST00000610827 TGM5-201 protein_coding Homo_sapiens 0 2095
ENST00000611276 TGM5-202 protein_coding Homo_sapiens 0 1751
ENST00000622115 TGM5-203 protein_coding Homo_sapiens 0 2095

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