C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor A (SII)-like 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054034 Tceal5 10090 - X:136200948-136203876 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066819 Tceal5-001 136200948-136203876 protein_coding
  ENSMUST00000131510 Tceal5-002 136201650-136203732 protein_coding
  ENSMUST00000151592 Tceal5-003 136201618-136203637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066819ENSMUST00000131510ENSMUST00000151592
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066819 0.487±0.11 0.182±0.09 1.737±0.07 21.173±16.85 0.306±0.02 0.143±0.11 0.074±0.03 0.184±0.10 12.351±5.92 0.110±0.05 10.423±1.26 0.592±0.30 2.636±2.55 0.078±0.05
ENSMUST00000131510 N/A N/A N/A N/A 0.270±0.00 N/A N/A N/A N/A N/A N/A 1.705±0.00 N/A N/A
ENSMUST00000151592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.043±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072A CIL_00072A_0002 CGP X:136168984-136203876
CIL_000729 CIL_000729_0002 CGP X:136200948-136215513

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196507 TCEAL3 transcription elongation factor A (SII)-like 3 protein_coding Homo_sapiens
ENSG00000204065 TCEAL5 transcription elongation factor A (SII)-like 5 protein_coding Homo_sapiens
ENSG00000204071 TCEAL6 transcription elongation factor A (SII)-like 6 protein_coding Homo_sapiens

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