C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor A (SII)-like 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204065 TCEAL5 9606 - X:103273691-103276872 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372680 TCEAL5-001 103273691-103276872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000372680
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000372680 0.154±0.00 0.028±0.00 26.042±23.81 0.445±0.00 0.981±0.00 0.033±0.00 0.029±0.00 0.224±0.12 2.290±1.98 0.046±0.04 24.083±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072A CIL_00072A_0001 CGP X:103252995-103276872
CIL_000729 CIL_000729_0001 CGP X:103273691-103311046

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031409 Tceal6 transcription elongation factor A (SII)-like 6 protein_coding Mus_musculus
ENSMUSG00000044550 Tceal3 transcription elongation factor A (SII)-like 3 protein_coding Mus_musculus
ENSMUSG00000054034 Tceal5 transcription elongation factor A (SII)-like 5 protein_coding Mus_musculus

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