C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vesicle-associated membrane protein, associated protein B and C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054455 Vapb 10090 + 2:173737511-173784336 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067530 Vapb-001 173737511-173784336 protein_coding
  ENSMUST00000154306 Vapb-002 173768200-173778125 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067530ENSMUST00000154306
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067530 12.385±1.74 15.874±2.81 5.990±0.71 8.020±2.99 8.388±1.35 9.408±0.40 7.542±0.39 11.696±0.67 6.137±1.55 11.175±0.66 7.798±3.74 9.899±2.75 6.248±3.35 4.528±1.59
ENSMUST00000154306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.976±0.00 24.098±0.72 25.529±8.95 10.186±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005794 ISS Golgi apparatus
GO:0006874 IEA cellular calcium ion homeostasis
GO:0006987 IEA activation of signaling protein activity involved in unfolded protein response
GO:0019048 ISS modulation by virus of host morphology or physiology
GO:0019899 ISS enzyme binding
GO:0030968 ISS endoplasmic reticulum unfolded protein response
GO:0042803 ISS protein homodimerization activity
GO:0045070 ISS positive regulation of viral genome replication
GO:0046982 ISS protein heterodimerization activity
GO:0048487 ISS beta-tubulin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070435 vapb vesicle-associated membrane protein, associated protein B and C protein_coding Danio_rerio
ENSG00000124164 VAPB VAMP (vesicle-associated membrane protein)-associated protein B and C protein_coding Homo_sapiens

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