C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055401 Fbxo6 10090 - 4:148145716-148152140 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030858 Fbxo6-001 148145787-148151913 protein_coding
  ENSMUST00000056965 Fbxo6-003 148145788-148152059 protein_coding
  ENSMUST00000105706 Fbxo6-007 148145716-148151908 protein_coding
  ENSMUST00000126615 Fbxo6-006 148146092-148149719 protein_coding
  ENSMUST00000132083 Fbxo6-005 148149444-148151646 protein_coding
  ENSMUST00000134261 Fbxo6-002 148146118-148151925 protein_coding
  ENSMUST00000152098 Fbxo6-004 148146009-148152140 protein_coding
  ENSMUST00000168503 Fbxo6-201 148145716-148152135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030858ENSMUST00000056965ENSMUST00000105706ENSMUST00000126615ENSMUST00000134261ENSMUST00000152098ENSMUST00000168503
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030858 9.205±1.43 23.673±5.26 17.410±4.34 2.135±0.38 14.647±1.84 14.381±2.87 11.228±1.22 12.011±1.34 11.181±8.97 17.663±2.42 13.826±2.52 10.700±1.21 5.208±0.32 6.045±0.37
ENSMUST00000056965 9.205±1.46 N/A 9.704±3.61 9.183±8.23 14.884±5.71 5.270±0.00 9.796±1.15 6.610±2.18 4.764±2.06 6.630±0.83 7.962±1.97 8.732±4.81 21.758±15.20 9.991±1.29
ENSMUST00000105706 N/A N/A 2.358±0.00 0.971±0.05 N/A N/A N/A N/A N/A N/A N/A 1.795±0.24 N/A N/A
ENSMUST00000126615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.533±0.00
ENSMUST00000134261 7.693±0.05 37.017±12.33 N/A N/A 16.558±1.75 16.418±0.63 12.511±0.52 8.498±1.66 20.919±0.54 19.443±3.01 N/A 10.544±3.19 N/A N/A
ENSMUST00000152098 N/A 9.057±0.00 N/A N/A 9.992±0.00 13.711±5.12 N/A N/A 12.445±7.94 N/A N/A N/A 5.778±0.30 N/A
ENSMUST00000168503 6.941±3.12 N/A 5.696±0.00 1.240±0.00 5.671±1.49 N/A N/A 3.827±0.31 3.467±1.53 7.208±1.07 3.643±0.00 6.102±0.00 16.680±6.23 4.778±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0002 VISTA 4:147665245-148272946
CIL_00022X CIL_00022X_000A CGP 4:148145716-148160482

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001948 IDA glycoprotein binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0006281 IEA DNA repair
GO:0006516 IDA glycoprotein catabolic process
GO:0006986 IEA response to unfolded protein
GO:0016567 IDA:IEA protein ubiquitination
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0030246 IDA carbohydrate binding
GO:0030433 IMP ER-associated ubiquitin-dependent protein catabolic process
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012035 zgc:100832 zgc:100832 protein_coding Danio_rerio
ENSDARG00000022623 fbxo44 F-box protein 44 protein_coding Danio_rerio
ENSDARG00000037645 zgc:173570 zgc:173570 protein_coding Danio_rerio
ENSDARG00000057884 zgc:114174 zgc:114174 protein_coding Danio_rerio
ENSDARG00000057899 zgc:114081 zgc:114081 protein_coding Danio_rerio
ENSDARG00000071029 si:dkey-147f3.4 si:dkey-147f3.4 protein_coding Danio_rerio
ENSDARG00000071044 zgc:153722 zgc:153722 protein_coding Danio_rerio
ENSDARG00000071045 si:rp71-1k13.6 si:rp71-1k13.6 protein_coding Danio_rerio
ENSDARG00000092077 si:dkey-147f3.4 si:dkey-147f3.4 protein_coding Danio_rerio
ENSDARG00000092166 si:dkey-147f3.8 si:dkey-147f3.8 protein_coding Danio_rerio
ENSG00000116663 FBXO6 F-box protein 6 protein_coding Homo_sapiens

Loading