C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056965 Fbxo6-003 ENSMUSG00000055401 10090 - 4:148145788-148152059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056965
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056965 9.205±1.46 9.704±3.61 9.183±8.23 14.884±5.71 5.270±0.00 9.796±1.15 6.610±2.18 4.764±2.06 6.630±0.83 7.962±1.97 8.732±4.81 21.758±15.20 9.991±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0002 VISTA 4:147665245-148272946
CIL_00022X CIL_00022X_000A CGP 4:148145716-148160482

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IDA glycoprotein binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0006281 IEA DNA repair
GO:0006516 IDA glycoprotein catabolic process
GO:0006986 IEA response to unfolded protein
GO:0016567 IDA:IEA protein ubiquitination
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0030246 IDA carbohydrate binding
GO:0030433 IMP ER-associated ubiquitin-dependent protein catabolic process
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Homologs

No Homologs available.

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