C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055421 Pcdh9 10090 - 14:93015512-93888732 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068992 Pcdh9-201 93015512-93888732 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068992
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068992 0.165±0.13 0.289±0.10 4.018±0.39 0.117±0.04 0.266±0.10 0.323±0.08 0.135±0.05 0.025±0.01 0.086±0.02 0.031±0.01 0.843±0.27 0.038±0.01 0.883±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005887 ISS integral component of plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0008150 ND biological_process
GO:0030426 IDA growth cone
GO:0044291 IDA cell-cell contact zone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063264 PCDH9 protocadherin 9 protein_coding Danio_rerio
ENSG00000184226 PCDH9 protocadherin 9 protein_coding Homo_sapiens

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