C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 4, regulatory subunit 1-like, pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055897 Ppp4r1l-ps 10090 - 2:173579320-173659640 pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000127022 Ppp4r1l-ps-011 173597133-173608818 processed_transcript
  ENSMUST00000132669 Ppp4r1l-ps-013 173581199-173629550 transcribed_unprocessed_pseudogene
  ENSMUST00000133185 Ppp4r1l-ps-008 173615270-173659535 retained_intron
  ENSMUST00000140992 Ppp4r1l-ps-010 173597147-173659640 processed_transcript
  ENSMUST00000141051 Ppp4r1l-ps-001 173579320-173659539 processed_transcript
  ENSMUST00000142320 Ppp4r1l-ps-004 173596106-173659539 processed_transcript
  ENSMUST00000148111 Ppp4r1l-ps-007 173596106-173659368 processed_transcript
  ENSMUST00000148213 Ppp4r1l-ps-009 173608480-173659504 retained_intron
  ENSMUST00000149947 Ppp4r1l-ps-006 173585853-173590762 processed_transcript
  ENSMUST00000151763 Ppp4r1l-ps-002 173580438-173659539 processed_transcript
  ENSMUST00000153162 Ppp4r1l-ps-003 173584905-173659539 retained_intron
  ENSMUST00000154908 Ppp4r1l-ps-005 173586586-173591313 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142320ENSMUST00000149947ENSMUST00000151763ENSMUST00000153162ENSMUST00000154908
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142320 N/A N/A N/A N/A N/A N/A 3.881±0.00 N/A N/A N/A N/A N/A N/A 49.753±5.34
ENSMUST00000149947 4.456±0.00 6.366±1.60 N/A N/A 5.305±0.00 N/A N/A N/A N/A 4.422±0.00 N/A 8.742±1.47 N/A N/A
ENSMUST00000151763 2.602±1.14 3.132±0.54 1.946±0.00 2.335±0.16 3.222±1.12 3.197±0.42 0.696±0.00 1.879±0.34 1.379±0.36 3.032±1.01 0.753±0.25 3.672±1.56 1.189±0.00 4.479±0.61
ENSMUST00000153162 2.389±0.82 2.912±0.64 4.497±0.19 3.170±1.89 2.592±0.33 1.932±0.10 0.529±0.00 1.732±0.37 1.819±0.37 2.660±0.20 1.384±0.49 4.925±1.76 1.872±0.42 3.786±0.00
ENSMUST00000154908 3.107±0.32 4.474±0.00 N/A N/A 2.999±0.00 4.040±0.00 N/A N/A 1.527±0.16 N/A N/A 7.892±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028J CIL_00028J_0002 CGP 2:173568666-173707343

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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